Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6RRW
DownloadVisualize
BU of 6rrw by Molmil
GOLGI ALPHA-MANNOSIDASE II in complex with (2R,3R,4R,5S)-1-(5-{[4-(3,4-Dihydro-2H-1,5-benzodioxepin-7-yl)benzyl]oxy}pentyl)-2-(hydroxymethyl)-3,4,5-piperidinetriol
Descriptor: (2~{R},3~{R},4~{R},5~{S})-1-[5-[[4-(3,4-dihydro-2~{H}-1,5-benzodioxepin-7-yl)phenyl]methoxy]pentyl]-2-(hydroxymethyl)piperidine-3,4,5-triol, Alpha-mannosidase 2, ZINC ION
Authors:Armstrong, Z, Lahav, D, Johnson, R, Kuo, C.L, Beenakker, T.J.M, de Boer, C, Wong, C.S, van Rijssel, E.R, Debets, M, Geurink, P.P, Ovaa, H, van der Stelt, M, Codee, J.D.C, Aerts, J.M.F.G, Wu, L, Overkleeft, H.S, Davies, G.J.
Deposit date:2019-05-20
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Manno- epi -cyclophellitols Enable Activity-Based Protein Profiling of Human alpha-Mannosidases and Discovery of New Golgi Mannosidase II Inhibitors.
J.Am.Chem.Soc., 142, 2020
7RZ3
DownloadVisualize
BU of 7rz3 by Molmil
The solution structure of remipede double-ICK toxin phi-Xibalbin3-Xt3a
Descriptor: Xt3a
Authors:Maxwell, M, Chin, Y.K, Mobli, M.
Deposit date:2021-08-27
Release date:2022-08-31
Last modified:2023-03-08
Method:SOLUTION NMR
Cite:A bivalent remipede toxin promotes calcium release via ryanodine receptor activation.
Nat Commun, 14, 2023
4WBQ
DownloadVisualize
BU of 4wbq by Molmil
Crystal structure of the exonuclease domain of QIP (QDE-2 interacting protein) solved by native-SAD phasing.
Descriptor: CALCIUM ION, QDE-2-interacting protein
Authors:Boland, A, Weinert, T, Weichenrieder, O, Wang, M.
Deposit date:2014-09-03
Release date:2014-12-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.693 Å)
Cite:Fast native-SAD phasing for routine macromolecular structure determination.
Nat.Methods, 12, 2015
4UXL
DownloadVisualize
BU of 4uxl by Molmil
Structure of Human ROS1 Kinase Domain in Complex with PF-06463922
Descriptor: (10R)-7-amino-12-fluoro-2,10,16-trimethyl-15-oxo-10,15,16,17-tetrahydro-2H-8,4-(metheno)pyrazolo[4,3-h][2,5,11]benzoxadiazacyclotetradecine-3-carbonitrile, PROTO-ONCOGENE TYROSINE-PROTEIN KINASE ROS
Authors:McTigue, M, Deng, Y, Liu, W, Brooun, A, Stewart, A.
Deposit date:2014-08-25
Release date:2015-03-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Pf-06463922 is a Potent and Selective Next-Generation Ros1/Alk Inhibitor Capable of Blocking Crizotinib-Resistant Ros1 Mutations.
Proc.Natl.Acad.Sci.USA, 112, 2015
4V1M
DownloadVisualize
BU of 4v1m by Molmil
Architecture of the RNA polymerase II-Mediator core transcription initiation complex
Descriptor: 5'-D(*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP)-3', 5'-D(*CP*CP*AP*GP*GP*AP)-3', 5'-D(*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP*TP*TP*CP *CP*BRUP*GP*GP*TP*C)-3', ...
Authors:Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P.
Deposit date:2014-09-29
Release date:2015-02-04
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Architecture of the RNA Polymerase II-Mediator Core Initiation Complex.
Nature, 518, 2015
7NFU
DownloadVisualize
BU of 7nfu by Molmil
Crystal structure of C-terminally truncated Geobacillus thermoleovorans nucleoid occlusion protein Noc
Descriptor: GLYCEROL, Nucleoid occlusion protein, SULFATE ION
Authors:Jalal, A.S.B, Tran, N.T, Wu, L.J, Ramakrishnan, K, Rejzek, M, Stevenson, C.E.M, Lawson, D.M, Errington, J, Le, T.B.K.
Deposit date:2021-02-07
Release date:2021-02-17
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:CTP regulates membrane-binding activity of the nucleoid occlusion protein Noc.
Mol.Cell, 81, 2021
7NFW
DownloadVisualize
BU of 7nfw by Molmil
Human 14-3-3 sigma in complex with human Estrogen Receptor alpha peptide
Descriptor: 14-3-3 protein sigma, Estrogen receptor
Authors:Roversi, P, Falcicchio, M, Doveston, R.
Deposit date:2021-02-08
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Cooperative stabilisation of 14-3-3 sigma protein-protein interactions via covalent protein modification.
Chem Sci, 12, 2021
7NG0
DownloadVisualize
BU of 7ng0 by Molmil
Crystal structure of N- and C-terminally truncated Geobacillus thermoleovorans nucleoid occlusion protein Noc
Descriptor: Nucleoid occlusion protein, SULFATE ION
Authors:Jalal, A.S.B, Tran, N.T, Wu, L.J, Ramakrishnan, K, Rejzek, M, Stevenson, C.E.M, Lawson, D.M, Errington, J, Le, T.B.K.
Deposit date:2021-02-08
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:CTP regulates membrane-binding activity of the nucleoid occlusion protein Noc.
Mol.Cell, 81, 2021
7NHZ
DownloadVisualize
BU of 7nhz by Molmil
NMR structure of Rv1813c from Mycobacterium tuberculosis
Descriptor: Uncharacterized protein Rv1813c
Authors:Barthe, P, Cohen-Gonsaud, M.
Deposit date:2021-02-11
Release date:2021-03-31
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A Mycobacterium tuberculosis effector targets mitochondrion, controls energy metabolism and limits cytochrome c exit.
To Be Published
8C3W
DownloadVisualize
BU of 8c3w by Molmil
Crystal structure of a computationally designed heme binding protein, dnHEM1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Ortmayer, M, Levy, C.
Deposit date:2022-12-29
Release date:2023-07-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Design of Heme Enzymes with a Tunable Substrate Binding Pocket Adjacent to an Open Metal Coordination Site.
J.Am.Chem.Soc., 145, 2023
7Z07
DownloadVisualize
BU of 7z07 by Molmil
Solution NMR structure of N-acetylglucosaminyltransferase V (GnTV) G26P mutant TMD
Descriptor: Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Authors:Silber, M, Muhle-Goll, C.
Deposit date:2022-02-22
Release date:2022-12-28
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Helical stability of the GnTV transmembrane domain impacts on SPPL3 dependent cleavage.
Sci Rep, 12, 2022
7Z08
DownloadVisualize
BU of 7z08 by Molmil
Solution NMR structure of N-acetylglucosaminyltransferase V (GnTV) G22L mutant TMD
Descriptor: Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Authors:Silber, M, Muhle-Goll, C.
Deposit date:2022-02-22
Release date:2022-12-28
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Helical stability of the GnTV transmembrane domain impacts on SPPL3 dependent cleavage.
Sci Rep, 12, 2022
7Z0B
DownloadVisualize
BU of 7z0b by Molmil
Solution NMR structure of N-acetylglucosaminyltransferase V (GnTV) G22L and G26L double mutant TMD
Descriptor: Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Authors:Silber, M, Muhle-Goll, C.
Deposit date:2022-02-22
Release date:2022-12-28
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Helical stability of the GnTV transmembrane domain impacts on SPPL3 dependent cleavage.
Sci Rep, 12, 2022
7Z2R
DownloadVisualize
BU of 7z2r by Molmil
Differences between the GluD1 and GluD2 receptors revealed by GluD1 X-ray crystallography, binding studies and molecular dynamics
Descriptor: Glutamate receptor ionotropic, delta-1, SULFATE ION
Authors:Masternak, M, Laulumaa, S, Kastrup, J.S.
Deposit date:2022-02-28
Release date:2023-01-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.574 Å)
Cite:Differences between the GluD1 and GluD2 receptors revealed by GluD1 X-ray crystallography, binding studies and molecular dynamics.
Febs J., 290, 2023
7NCB
DownloadVisualize
BU of 7ncb by Molmil
Glutathione-S-transferase GliG mutant H26A
Descriptor: Glutathione S-transferase GliG
Authors:Groll, M, Huber, E.M.
Deposit date:2021-01-28
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin.
Angew.Chem.Int.Ed.Engl., 60, 2021
7NC9
DownloadVisualize
BU of 7nc9 by Molmil
Glutathione-S-transferase GliG mutant H26N
Descriptor: 1,2-ETHANEDIOL, Glutathione S-transferase GliG
Authors:Groll, M, Huber, E.M.
Deposit date:2021-01-28
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin.
Angew.Chem.Int.Ed.Engl., 60, 2021
7NCM
DownloadVisualize
BU of 7ncm by Molmil
Glutathione-S-transferase GliG mutant E82A
Descriptor: 1,2-ETHANEDIOL, Glutathione S-transferase GliG
Authors:Groll, M, Huber, E.M.
Deposit date:2021-01-29
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin.
Angew.Chem.Int.Ed.Engl., 60, 2021
7NCU
DownloadVisualize
BU of 7ncu by Molmil
Glutathione-S-transferase GliG mutant K127G in complex with oxidized glutathione
Descriptor: 1,2-ETHANEDIOL, Glutathione S-transferase GliG, OXIDIZED GLUTATHIONE DISULFIDE
Authors:Groll, M, Huber, E.M.
Deposit date:2021-01-29
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin.
Angew.Chem.Int.Ed.Engl., 60, 2021
7NCT
DownloadVisualize
BU of 7nct by Molmil
Glutathione-S-transferase GliG mutant K127G
Descriptor: Glutathione S-transferase GliG
Authors:Groll, M, Huber, E.M.
Deposit date:2021-01-29
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin.
Angew.Chem.Int.Ed.Engl., 60, 2021
7NC2
DownloadVisualize
BU of 7nc2 by Molmil
Glutathione-S-transferase GliG (space group P3221)
Descriptor: Glutathione S-transferase GliG
Authors:Groll, M, Huber, E.M.
Deposit date:2021-01-28
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin.
Angew.Chem.Int.Ed.Engl., 60, 2021
7NCE
DownloadVisualize
BU of 7nce by Molmil
Glutathione-S-transferase GliG mutant N27A
Descriptor: 1,2-ETHANEDIOL, Glutathione S-transferase GliG
Authors:Groll, M, Huber, E.M.
Deposit date:2021-01-28
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin.
Angew.Chem.Int.Ed.Engl., 60, 2021
7NCL
DownloadVisualize
BU of 7ncl by Molmil
Glutathione-S-transferase GliG mutant E82Q
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Glutathione S-transferase GliG
Authors:Groll, M, Huber, E.M.
Deposit date:2021-01-29
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin.
Angew.Chem.Int.Ed.Engl., 60, 2021
7NC1
DownloadVisualize
BU of 7nc1 by Molmil
Glutathione-S-transferase GliG with partially disordered active site
Descriptor: ACETATE ION, Glutathione S-transferase GliG
Authors:Groll, M, Huber, E.M.
Deposit date:2021-01-28
Release date:2021-05-12
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin.
Angew.Chem.Int.Ed.Engl., 60, 2021
7NCD
DownloadVisualize
BU of 7ncd by Molmil
Glutathione-S-transferase GliG mutant N27D
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Glutathione S-transferase GliG, ...
Authors:Groll, M, Huber, E.M.
Deposit date:2021-01-28
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin.
Angew.Chem.Int.Ed.Engl., 60, 2021
7NC8
DownloadVisualize
BU of 7nc8 by Molmil
Glutathione-S-transferase GliG mutant S24A
Descriptor: 1,2-ETHANEDIOL, Glutathione S-transferase GliG
Authors:Groll, M, Huber, E.M.
Deposit date:2021-01-28
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin.
Angew.Chem.Int.Ed.Engl., 60, 2021

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon