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2HNK
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BU of 2hnk by Molmil
Crystal structure of SAM-dependent O-methyltransferase from pathogenic bacterium Leptospira interrogans
Descriptor: DI(HYDROXYETHYL)ETHER, S-ADENOSYL-L-HOMOCYSTEINE, SAM-dependent O-methyltransferase, ...
Authors:Hou, X, Wei, Z, Gong, W.
Deposit date:2006-07-13
Release date:2007-09-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of SAM-dependent O-methyltransferase from pathogenic bacterium Leptospira interrogans.
J.Struct.Biol., 159, 2007
7T9B
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BU of 7t9b by Molmil
ApexGT5 in complex with GT5-d42.16 and RM20A3 Fabs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Berndsen, Z.T, Ward, A.B.
Deposit date:2021-12-18
Release date:2022-09-28
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:Priming HIV Envelope V2 Apex-directed broadly neutralizing antibody responses with protein or mRNA immunogens
Immunity, 2022
7T9A
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BU of 7t9a by Molmil
ApexGT2 in complex with GT2-d42.16 and RM20A3 Fabs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GT2-d42.16 Fab Heavy Chain, ...
Authors:Berndsen, Z.T, Ward, A.B.
Deposit date:2021-12-18
Release date:2022-09-28
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Priming HIV Envelope V2 Apex-directed broadly neutralizing antibody responses with protein or mRNA immunogens
Immunity, 2022
4QR5
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BU of 4qr5 by Molmil
Brd4 Bromodomain 1 complex with its novel inhibitors
Descriptor: Bromodomain-containing protein 4, N-[3-(cyclopentylsulfamoyl)-5-(2-oxo-2,3-dihydro-1,3-thiazol-4-yl)phenyl]cyclopropanecarboxamide
Authors:Xiong, B, Cao, D.Y, Chen, T.T, Xu, Y.C.
Deposit date:2014-06-30
Release date:2015-07-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Fragment-based drug discovery of 2-thiazolidinones as BRD4 inhibitors: 2. Structure-based optimization
J.Med.Chem., 58, 2015
4QR3
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BU of 4qr3 by Molmil
Brd4 Bromodomain 1 complex with its novel inhibitors
Descriptor: Bromodomain-containing protein 4, N-cyclopentyl-3-(2-oxo-2,3-dihydro-1,3-thiazol-4-yl)benzenesulfonamide
Authors:Xiong, B, Cao, D.Y, Chen, T.T, Xu, Y.C.
Deposit date:2014-06-30
Release date:2015-07-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.374 Å)
Cite:Fragment-based drug discovery of 2-thiazolidinones as BRD4 inhibitors: 2. Structure-based optimization
J.Med.Chem., 58, 2015
4QR4
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BU of 4qr4 by Molmil
Brd4 Bromodomain 1 complex with its novel inhibitors
Descriptor: 2-chloro-N-cyclopentyl-5-(2-oxo-2,3-dihydro-1,3-thiazol-4-yl)benzenesulfonamide, Bromodomain-containing protein 4
Authors:Xiong, B, Cao, D.Y, Chen, T.T, Xu, Y.C.
Deposit date:2014-06-30
Release date:2015-07-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Fragment-based drug discovery of 2-thiazolidinones as BRD4 inhibitors: 2. Structure-based optimization
J.Med.Chem., 58, 2015
3F8T
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BU of 3f8t by Molmil
Crystal structure analysis of a full-length MCM homolog from Methanopyrus kandleri
Descriptor: Predicted ATPase involved in replication control, Cdc46/Mcm family
Authors:Bae, B, Nair, S.K.
Deposit date:2008-11-13
Release date:2009-03-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insights into the Architecture of the Replicative Helicase from the Structure of an Archaeal MCM Homolog.
Structure, 17, 2009
8IV4
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BU of 8iv4 by Molmil
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 8H12 and 3E2 (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, heavy chain of 3E2, ...
Authors:Sun, H, Jiang, Y, Zheng, Q, Li, S, Xia, N.
Deposit date:2023-03-26
Release date:2023-08-16
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:Two antibodies show broad, synergistic neutralization against SARS-CoV-2 variants by inducing conformational change within the RBD.
Protein Cell, 15, 2024
8IV8
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BU of 8iv8 by Molmil
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 3E2 and 1C4 (local refinement)
Descriptor: Spike protein S1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, heavy chain of 1C4, ...
Authors:Sun, H, Jiang, Y, Zheng, Q, Li, S, Xia, N.
Deposit date:2023-03-26
Release date:2023-08-16
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.92 Å)
Cite:Two antibodies show broad, synergistic neutralization against SARS-CoV-2 variants by inducing conformational change within the RBD.
Protein Cell, 15, 2024
8IVA
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BU of 8iva by Molmil
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs XMA01 and 3E2 (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, heavy chain of 3E2, ...
Authors:Sun, H, Jiang, Y, Zheng, Q, Li, S, Xia, N.
Deposit date:2023-03-26
Release date:2023-08-16
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.95 Å)
Cite:Two antibodies show broad, synergistic neutralization against SARS-CoV-2 variants by inducing conformational change within the RBD.
Protein Cell, 15, 2024
8IV5
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BU of 8iv5 by Molmil
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 8H12 and 1C4 (local refinement)
Descriptor: Spike protein S1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, heavy chain of 1C4, ...
Authors:Sun, H, Jiang, Y, Zheng, Q, Li, S, Xia, N.
Deposit date:2023-03-26
Release date:2023-08-16
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Two antibodies show broad, synergistic neutralization against SARS-CoV-2 variants by inducing conformational change within the RBD.
Protein Cell, 15, 2024
3GAD
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BU of 3gad by Molmil
Structure of apomif
Descriptor: ACETIC ACID, Macrophage migration inhibitory factor-like protein, SULFATE ION
Authors:Zhou, Y.-F, Su, X.-D, Shao, D, Wang, H.
Deposit date:2009-02-17
Release date:2009-12-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional comparison of MIF ortholog from Plasmodium yoelii with MIF from its rodent host
Mol.Immunol., 47, 2010
3GAC
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BU of 3gac by Molmil
Structure of mif with HPP
Descriptor: 3-(4-HYDROXY-PHENYL)PYRUVIC ACID, ACETIC ACID, Macrophage migration inhibitory factor-like protein, ...
Authors:Zhou, Y.-F, Su, X.-D, Shao, D, Wang, H.
Deposit date:2009-02-17
Release date:2009-12-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional comparison of MIF ortholog from Plasmodium yoelii with MIF from its rodent host
Mol.Immunol., 47, 2010
4IKN
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BU of 4ikn by Molmil
Crystal structure of adaptor protein complex 3 (AP-3) mu3A subunit C-terminal domain, in complex with a sorting peptide from TGN38
Descriptor: AP-3 complex subunit mu-1, Trans-Golgi network integral membrane protein TGN38
Authors:Mardones, G.A, Kloer, D.P, Burgos, P.V, Bonifacino, J.S, Hurley, J.H.
Deposit date:2012-12-26
Release date:2013-02-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Structural basis for the recognition of tyrosine-based sorting signals by the mu 3A subunit of the AP-3 adaptor complex.
J.Biol.Chem., 288, 2013
2LKN
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BU of 2lkn by Molmil
Solution structure of the PPIase domain of human aryl-hydrocarbon receptor-interacting protein (AIP)
Descriptor: AH receptor-interacting protein
Authors:Linnert, M, Lin, Y, Manns, A, Haupt, K, Paschke, A, Fischer, G, Weiwad, M, Luecke, C.
Deposit date:2011-10-17
Release date:2012-10-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The FKBP-Type Domain of the Human Aryl Hydrocarbon Receptor-Interacting Protein Reveals an Unusual Hsp90 Interaction.
Biochemistry, 52, 2013
2MQ8
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BU of 2mq8 by Molmil
Solution NMR Structure of De novo designed protein LFR1 1 with ferredoxin fold, Northeast Structural Genomics Consortium (NESG) Target OR414
Descriptor: De novo designed protein LFR1
Authors:Liu, G, Lin, Y, Koga, N, Koga, R, Xiao, R, Janjua, H, Pederson, K, Acton, T.B, Kornhaber, G, Everett, J.K, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2014-06-12
Release date:2014-08-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Control over overall shape and size in de novo designed proteins.
Proc.Natl.Acad.Sci.USA, 112, 2015
2JZY
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BU of 2jzy by Molmil
Solution structure of C-terminal effector domain of putative two-component-system response regulator involved in copper resistance from Klebsiella pneumoniae
Descriptor: Transcriptional regulatory protein PcoR
Authors:Hung, K, Fang, P, Chang, C, Tsai, S, Huang, T.
Deposit date:2008-01-22
Release date:2009-01-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of C-terminal effector domain of putative two-component-system response regulator involved in copper resistance from Klebsiella pneumoniae
To be Published
5XOB
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BU of 5xob by Molmil
Crystal structure of apo TiaS (tRNAIle2 agmatidine synthetase)
Descriptor: MAGNESIUM ION, ZINC ION, tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS
Authors:Dong, J.
Deposit date:2017-05-27
Release date:2018-08-29
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structure of tRNA-Modifying Enzyme TiaS and Motions of Its Substrate Binding Zinc Ribbon.
J. Mol. Biol., 430, 2018
5U6Z
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BU of 5u6z by Molmil
Crystal Structure of Xenopus laevis Apex2 C-terminal Znf-GRF Domain
Descriptor: DNA-(apurinic or apyrimidinic site) lyase, SULFATE ION, ZINC ION
Authors:Wallace, B.D, Williams, R.S.
Deposit date:2016-12-09
Release date:2017-01-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:APE2 Zf-GRF facilitates 3'-5' resection of DNA damage following oxidative stress.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5WYS
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BU of 5wys by Molmil
luciferase with inhibitor 3i
Descriptor: 5-[(3R)-3-(4-boranylphenyl)-3-oxidanyl-propyl]-2-oxidanyl-benzoic acid, Luciferin 4-monooxygenase
Authors:Gu, L, Su, J, Wang, F.
Deposit date:2017-01-15
Release date:2017-12-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.999 Å)
Cite:Inhibiting Firefly Bioluminescence by Chalcones
Anal. Chem., 89, 2017
8IBX
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BU of 8ibx by Molmil
Structure of R2 with 3'UTR and DNA in unwinding state
Descriptor: 3'UTR, DNA (60-MER), Reverse transcriptase-like protein, ...
Authors:Deng, P, Tan, S, Wang, J, Liu, J.J.
Deposit date:2023-02-10
Release date:2023-09-20
Method:ELECTRON MICROSCOPY (3.74 Å)
Cite:Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon.
Cell, 186, 2023
8IBY
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BU of 8iby by Molmil
Structure of R2 with 5'ORF
Descriptor: 5'ORF RNA, Reverse transcriptase-like protein, ZINC ION
Authors:Deng, P, Tan, S, Wang, J, Liu, J.J.
Deposit date:2023-02-10
Release date:2023-09-20
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon.
Cell, 186, 2023
8IBW
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BU of 8ibw by Molmil
Structure of R2 with 3'UTR and DNA in binding state
Descriptor: 3'UTR, DNA (60-MER), Reverse transcriptase-like protein, ...
Authors:Deng, P, Tan, S, Wang, J, Liu, J.J.
Deposit date:2023-02-10
Release date:2023-09-20
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon.
Cell, 186, 2023
8IBZ
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BU of 8ibz by Molmil
Structure of R2 with 5'ORF and 3'UTR
Descriptor: 5ORF-linker-3UTR, Reverse transcriptase-like protein, ZINC ION
Authors:Deng, P, Tan, S, Wang, J, Liu, J.J.
Deposit date:2023-02-10
Release date:2023-09-20
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon.
Cell, 186, 2023
4M6V
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BU of 4m6v by Molmil
Structure of the carboxyl transferase domain from Rhizobium etli pyruvate carboxylase with pyruvate and biocytin
Descriptor: Biocytin, CHLORIDE ION, GLYCEROL, ...
Authors:Lietzan, A.D, St.Maurice, M.
Deposit date:2013-08-11
Release date:2014-09-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The role of biotin and oxamate in the carboxyltransferase reaction of pyruvate carboxylase.
Arch.Biochem.Biophys., 562C, 2014

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PDB entries from 2024-06-12

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