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7UR7
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BU of 7ur7 by Molmil
17_bp_sh3, a small beta-barrel de novo designed protein
Descriptor: 17_bp_sh3
Authors:Bera, A.K, Kim, D, Baker, D.
Deposit date:2022-04-21
Release date:2023-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:De novo design of small beta barrel proteins.
Proc.Natl.Acad.Sci.USA, 120, 2023
7UR8
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BU of 7ur8 by Molmil
170_h_ob, a small beta-barrel de novo designed protein
Descriptor: 170_h_ob
Authors:Bera, A.K, Kim, D, Baker, D.
Deposit date:2022-04-21
Release date:2023-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:De novo design of small beta barrel proteins.
Proc.Natl.Acad.Sci.USA, 120, 2023
5Z9G
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BU of 5z9g by Molmil
Crystal structure of KAI2
Descriptor: Probable esterase KAI2
Authors:Kim, K.L, Cha, J.S, Soh, M.S, Cho, H.S.
Deposit date:2018-02-03
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:A missense allele of KARRIKIN-INSENSITIVE2 impairs ligand-binding and downstream signaling in Arabidopsis thaliana.
J. Exp. Bot., 69, 2018
5Z9H
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BU of 5z9h by Molmil
Crystal structure of KAI2_ply2(A219V)
Descriptor: Probable esterase KAI2
Authors:Kim, K.L, Cha, J.S, Soh, M.S, Cho, H.S.
Deposit date:2018-02-03
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:A missense allele of KARRIKIN-INSENSITIVE2 impairs ligand-binding and downstream signaling in Arabidopsis thaliana.
J. Exp. Bot., 69, 2018
2GQT
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BU of 2gqt by Molmil
Crystal Structure of UDP-N-Acetylenolpyruvylglucosamine Reductase (MurB) from Thermus caldophilus
Descriptor: CALCIUM ION, FLAVIN-ADENINE DINUCLEOTIDE, UDP-N-Acetylenolpyruvylglucosamine Reductase
Authors:Kim, M.-K, Eom, S.H.
Deposit date:2006-04-21
Release date:2006-12-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of UDP-N-acetylenolpyruvylglucosamine reductase (MurB) from Thermus caldophilus
Proteins, 66, 2006
2GQU
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BU of 2gqu by Molmil
Crystal Structure of UDP-N-Acetylenolpyruvylglucosamine Reductase (MurB) from Thermus caldophilus
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, UDP-N-Acetylenolpyruvylglucosamine Reductase, URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL) BUTYRIC ACID
Authors:Eom, S.H, Kim, M.-K.
Deposit date:2006-04-21
Release date:2006-12-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of UDP-N-acetylenolpyruvylglucosamine reductase (MurB) from Thermus caldophilus
Proteins, 66, 2006
2FJK
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BU of 2fjk by Molmil
Crystal structure of Fructose-1,6-Bisphosphate Aldolase in Thermus caldophilus
Descriptor: 1,3-DIHYDROXYACETONEPHOSPHATE, Fructose-bisphosphate aldolase
Authors:Lee, J.H, Im, Y.J, Rho, S.-H, Kim, M.-K, Kang, G.B, Eom, S.H.
Deposit date:2006-01-03
Release date:2006-08-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Stereoselectivity of fructose-1,6-bisphosphate aldolase in Thermus caldophilus
Biochem.Biophys.Res.Commun., 347, 2006
2JL1
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BU of 2jl1 by Molmil
Structural insight into bioremediation of triphenylmethane dyes by Citrobacter sp. triphenylmethane reductase
Descriptor: GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TRIPHENYLMETHANE REDUCTASE
Authors:Kim, Y, Park, H.J, Kwak, S.N, Kim, M.H.
Deposit date:2008-09-02
Release date:2008-09-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural Insight Into Bioremediation of Triphenylmethane Dyes by Citrobacter Sp. Triphenylmethane Reductase
J.Biol.Chem., 283, 2008
4FXB
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BU of 4fxb by Molmil
Crystal structure of CYP105N1 from Streptomyces coelicolor: a cytochrome P450 oxidase in the coelibactin siderophore biosynthetic pathway
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Putative cytochrome P450
Authors:Hong, M.K, Lim, Y.R, Kim, J.K, Kim, D.H, Kang, L.W.
Deposit date:2012-07-03
Release date:2012-11-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of cytochrome P450 CYP105N1 from Streptomyces coelicolor, an oxidase in the coelibactin siderophore biosynthetic pathway
Arch.Biochem.Biophys., 528, 2012
3WT4
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BU of 3wt4 by Molmil
Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa
Descriptor: CARBONATE ION, Probable M18 family aminopeptidase 2, ZINC ION
Authors:Nguyen, D.D, Pandian, R, Kim, D.D, Ha, S.C, Yoon, H.J, Kim, K.S, Yun, K.H, Kim, J.H, Kim, K.K.
Deposit date:2014-04-07
Release date:2014-04-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa
Biochem.Biophys.Res.Commun., 447, 2014
6NIZ
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BU of 6niz by Molmil
Atomic structure of a fluorescent Ag8 cluster templated by a multistranded DNA scaffold
Descriptor: DNA (5'-D(*AP*AP*CP*CP*CP*CP)-3'), SILVER ION
Authors:Lieberman, R.L, Huard, D.J.E.
Deposit date:2019-01-02
Release date:2019-01-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:Atomic Structure of a Fluorescent Ag8Cluster Templated by a Multistranded DNA Scaffold.
J.Am.Chem.Soc., 141, 2019
6L39
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BU of 6l39 by Molmil
Cytochrome P450 107G1 (RapN)
Descriptor: Cytochrome P450, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ...
Authors:Kim, V.C, Kim, D.H, Lim, Y.R, Lee, I.H, Lee, J.H, Kang, L.W.
Deposit date:2019-10-10
Release date:2020-09-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Structural insights into CYP107G1 from rapamycin-producing Streptomyces rapamycinicus.
Arch.Biochem.Biophys., 692, 2020
6PHF
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BU of 6phf by Molmil
Pfs25 in complex with the human transmission blocking antibody 2587
Descriptor: 25 kDa ookinete surface antigen, 2587 Antibody Fab, Heavy Chain, ...
Authors:McLeod, B.R, Julien, J.P.
Deposit date:2019-06-25
Release date:2019-10-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Potent antibody lineage against malaria transmission elicited by human vaccination with Pfs25.
Nat Commun, 10, 2019
6PHH
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BU of 6phh by Molmil
Unliganded human transmission blocking antibody 2544
Descriptor: 2544 Antibody Fab, Heavy Chain, Light Chain, ...
Authors:McLeod, B.R, Julien, J.P.
Deposit date:2019-06-25
Release date:2019-10-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Potent antibody lineage against malaria transmission elicited by human vaccination with Pfs25.
Nat Commun, 10, 2019
6PHC
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BU of 6phc by Molmil
Pfs25 in complex with the human transmission blocking antibody 2544
Descriptor: 25 kDa ookinete surface antigen, 2544 Antibody Fab, Heavy Chain, ...
Authors:McLeod, B.R, Julien, J.P.
Deposit date:2019-06-25
Release date:2019-10-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Potent antibody lineage against malaria transmission elicited by human vaccination with Pfs25.
Nat Commun, 10, 2019
6PHB
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BU of 6phb by Molmil
Pfs25 in complex with the human transmission blocking antibody 2530
Descriptor: 1,2-ETHANEDIOL, 25 kDa ookinete surface antigen, 2530 Antibody Fab, ...
Authors:McLeod, B.R, Julien, J.P.
Deposit date:2019-06-25
Release date:2019-10-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Potent antibody lineage against malaria transmission elicited by human vaccination with Pfs25.
Nat Commun, 10, 2019
3EYI
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BU of 3eyi by Molmil
The crystal structure of the second Z-DNA binding domain of human DAI (ZBP1) in complex with Z-DNA
Descriptor: 5'-TCGCGCG-3', Z-DNA-binding protein 1
Authors:Ha, S.C, Kim, K.K.
Deposit date:2008-10-21
Release date:2009-01-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The crystal structure of the second Z-DNA binding domain of human DAI (ZBP1) in complex with Z-DNA reveals an unusual binding mode to Z-DNA.
Proc.Natl.Acad.Sci.USA, 105, 2008
5YL7
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BU of 5yl7 by Molmil
Proteases from Pseudoalteromonas arctica PAMC 21717 (Pro21717)
Descriptor: CALCIUM ION, Copurified unknown peptide, Pseudoalteromonas arctica PAMC 21717
Authors:Lee, J.H, Lee, C.W.
Deposit date:2017-10-17
Release date:2018-01-31
Last modified:2018-09-12
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of a cold-active protease (Pro21717) from the psychrophilic bacterium, Pseudoalteromonas arctica PAMC 21717, at 1.4 angstrom resolution: Structural adaptations to cold and functional analysis of a laundry detergent enzyme
PLoS ONE, 13, 2018
3RFS
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BU of 3rfs by Molmil
Design of a binding scaffold based on variable lymphocyte receptors of jawless vertebrates by module engineering
Descriptor: Internalin B, repeat modules, Variable lymphocyte receptor B, ...
Authors:Kim, H.J, Cheong, H.K, Jeon, Y.H.
Deposit date:2011-04-06
Release date:2012-03-14
Last modified:2017-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Design of a binding scaffold based on variable lymphocyte receptors of jawless vertebrates by module engineering
Proc.Natl.Acad.Sci.USA, 109, 2012
3RFJ
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BU of 3rfj by Molmil
Design of a binding scaffold based on variable lymphocyte receptors of jawless vertebrates by module engineering
Descriptor: Internalin B, repeat modules, Variable lymphocyte receptor, ...
Authors:Kim, H.J, Cheong, H.K, Jeon, Y.H.
Deposit date:2011-04-06
Release date:2012-03-14
Last modified:2017-08-16
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Design of a binding scaffold based on variable lymphocyte receptors of jawless vertebrates by module engineering
Proc.Natl.Acad.Sci.USA, 109, 2012
6L3A
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BU of 6l3a by Molmil
Cytochrome P450 107G1 (RapN) with everolimus
Descriptor: Cytochrome P450, Everolimus, PROTOPORPHYRIN IX CONTAINING FE
Authors:Km, V.C, Kim, D.H, Lim, Y.R, Lee, I.H, Lee, J.H, Kang, L.W.
Deposit date:2019-10-10
Release date:2020-09-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural insights into CYP107G1 from rapamycin-producing Streptomyces rapamycinicus.
Arch.Biochem.Biophys., 692, 2020
2FB9
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BU of 2fb9 by Molmil
Crystal structure of the Apo form of D-alanine: D-alanine ligase (Ddl) from Thermus caldophilus: a basis for the substrate-induced conformational changes
Descriptor: D-alanine:D-alanine ligase
Authors:Lee, J.H, Na, Y, Eom, S.H.
Deposit date:2005-12-08
Release date:2006-08-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the apo form of D-alanine: D-alanine ligase (Ddl) from Thermus caldophilus: A basis for the substrate-induced conformational changes
Proteins, 64, 2006
3ULA
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BU of 3ula by Molmil
Crystal structure of the TV3 mutant F63W-MD-2-Eritoran complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-O-DECYL-2-DEOXY-6-O-{2-DEOXY-3-O-[(3R)-3-METHOXYDECYL]-6-O-METHYL-2-[(11Z)-OCTADEC-11-ENOYLAMINO]-4-O-PHOSPHONO-BETA-D-GLUCOPYRANOSYL}-2-[(3-OXOTETRADECANOYL)AMINO]-1-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE, Lymphocyte antigen 96, ...
Authors:Kim, H.J, Cheong, H.K, Jeon, Y.H.
Deposit date:2011-11-10
Release date:2012-04-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure-Based Rational Design of a Toll-like Receptor 4 (TLR4) Decoy Receptor with High Binding Affinity for a Target Protein.
Plos One, 7, 2012
3UL9
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BU of 3ul9 by Molmil
structure of the TV3 mutant M41E
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, Toll-like receptor 4, ...
Authors:Kim, H.J, Cheong, H.K, Jeon, Y.H.
Deposit date:2011-11-10
Release date:2012-05-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure-Based Rational Design of a Toll-like Receptor 4 (TLR4) Decoy Receptor with High Binding Affinity for a Target Protein.
Plos One, 7, 2012
3UL8
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BU of 3ul8 by Molmil
Crystal structure of the TV3 mutant V134L
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, Toll-like receptor 4, ...
Authors:Kim, H.J, Cheong, H.K, Jeon, Y.H.
Deposit date:2011-11-10
Release date:2012-04-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Based Rational Design of a Toll-like Receptor 4 (TLR4) Decoy Receptor with High Binding Affinity for a Target Protein.
Plos One, 7, 2012

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