Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2YT0
DownloadVisualize
BU of 2yt0 by Molmil
Solution structure of the chimera of the C-terminal tail peptide of APP and the C-terminal PID domain of Fe65L
Descriptor: Amyloid beta A4 protein and Amyloid beta A4 precursor protein-binding family B member 2
Authors:Li, H, Koshiba, S, Tochio, N, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of the C-terminal phosphotyrosine interaction domain of Fe65L1 complexed with the cytoplasmic tail of amyloid precursor protein reveals a novel peptide binding mode
J.Biol.Chem., 283, 2008
2YU3
DownloadVisualize
BU of 2yu3 by Molmil
Solution structure of the domain swapped WingedHelix in DNA-directed RNA polymerase III 39 kDa polypeptide
Descriptor: DNA-directed RNA polymerase III 39 kDa polypeptide F variant
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the domain swapped WingedHelix in DNA-directed RNA polymerase III 39 kDa polypeptide
To be Published
2YUI
DownloadVisualize
BU of 2yui by Molmil
Solution structure of the N-terminal domain in human cytokine-induced apoptosis inhibitor anamorsin
Descriptor: Anamorsin
Authors:Saito, K, Tomizawa, T, Tochio, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2008-04-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the N-terminal domain in human cytokine-induced apoptosis inhibitor anamorsin
To be Published
1V98
DownloadVisualize
BU of 1v98 by Molmil
Crystal Structure Analysis of Thioredoxin from Thermus thermophilus
Descriptor: MAGNESIUM ION, SULFATE ION, thioredoxin
Authors:Rehse, P.H, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-21
Release date:2005-02-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystallographic Analysis of Thioredoxin from the Thermophilic Bacteria Thermus thermophilus
To be Published
2YX0
DownloadVisualize
BU of 2yx0 by Molmil
Crystal structure of P. horikoshii TYW1
Descriptor: radical sam enzyme
Authors:Goto-Ito, S, Ishii, R, Ito, T, Shibata, R, Fusatomi, E, Sekine, S, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-23
Release date:2007-10-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structure of an archaeal TYW1, the enzyme catalyzing the second step of wye-base biosynthesis
Acta Crystallogr.,Sect.D, 63, 2007
1VBI
DownloadVisualize
BU of 1vbi by Molmil
Crystal structure of type 2 malate/lactate dehydrogenase from thermus thermophilus HB8
Descriptor: 1,2-ETHANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, ...
Authors:Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-02-27
Release date:2005-04-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of type 2 malate/lactate dehydrogenase from thermus thermophilus HB8
To be Published
1V38
DownloadVisualize
BU of 1v38 by Molmil
Solution structure of the Sterile Alpha Motif (SAM) domain of mouse SAMSN1
Descriptor: SAM-domain protein SAMSN-1
Authors:Goroncy, A, Kigawa, T, Koshiba, S, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-29
Release date:2004-04-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Sterile Alpha Motif (SAM) domain of mouse SAMSN1
To be Published
2YUG
DownloadVisualize
BU of 2yug by Molmil
Solution structure of mouse FRG1 protein
Descriptor: Protein FRG1
Authors:Saito, K, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2008-04-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of mouse FRG1 protein
To be Published
2YUY
DownloadVisualize
BU of 2yuy by Molmil
Solution Structure of PDZ domain of Rho GTPase Activating Protein 21
Descriptor: Rho GTPase activating protein 21
Authors:Niraula, T.N, Yoneyama, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of PDZ domain of Rho GTPase Activating Protein 21
To be Published
1V4P
DownloadVisualize
BU of 1v4p by Molmil
Crystal structure of Alanyl-tRNA Synthetase from Pyrococcus horikoshii OT3
Descriptor: ZINC ION, alanyl-tRNA synthetase
Authors:Ishijima, J, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-14
Release date:2004-11-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of alanyl-tRNA synthetase editing-domain homolog (PH0574) from a hyperthermophile, Pyrococcus horikoshii OT3 at 1.45 A resolution
Proteins, 62, 2006
2YQL
DownloadVisualize
BU of 2yql by Molmil
Solution structure of the PHD domain in PHD finger protein 21A
Descriptor: PHD finger protein 21A, ZINC ION
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2008-03-18
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the PHD domain in PHD finger protein 21A
To be Published
2YRT
DownloadVisualize
BU of 2yrt by Molmil
Solution structure of the CHORD domain of human CHORD-containing protein 1
Descriptor: CHORD containing protein-1, ZINC ION
Authors:Nameki, N, Saito, K, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the CHORD domain of human CHORD-containing protein 1
To be Published
2YS6
DownloadVisualize
BU of 2ys6 by Molmil
Crystal structure of GAR synthetase from Geobacillus kaustophilus
Descriptor: ADENOSINE MONOPHOSPHATE, GLYCINE, Phosphoribosylglycinamide synthetase
Authors:Baba, S, Kanagawa, M, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2007-10-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
2YS8
DownloadVisualize
BU of 2ys8 by Molmil
Solution structure of the DnaJ-like domain from human ras-associated protein Rap1
Descriptor: Rab-related GTP-binding protein RabJ
Authors:Ohnishi, S, Sato, M, Koshiba, S, Harada, T, Watanabe, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the DnaJ-like domain from human ras-associated protein Rap1
To be Published
2YT9
DownloadVisualize
BU of 2yt9 by Molmil
Solution structure of C2H2 type Zinc finger domain 345 in Zinc finger protein 278
Descriptor: ZINC ION, zinc finger-containing protein 1
Authors:Kasahara, N, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of C2H2 type Zinc finger domain 345 in Zinc finger protein 278
To be Published
2YTS
DownloadVisualize
BU of 2yts by Molmil
Solution structure of the C2H2 type zinc finger (region 715-747) of human Zinc finger protein 484
Descriptor: ZINC ION, Zinc finger protein 484
Authors:Tochio, N, Tomizawa, T, Abe, H, Saito, K, Li, H, Sato, M, Koshiba, S, Kobayashi, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the C2H2 type zinc finger (region 715-747) of human Zinc finger protein 484
To be Published
1V7Q
DownloadVisualize
BU of 1v7q by Molmil
Crystal structure of phosphoglycerate mutase from Thermus thermophilus HB8
Descriptor: phosphoglycerate mutase
Authors:Sugahara, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-12-22
Release date:2005-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Crystal structure of phosphoglycerate mutase from Thermus thermophilus HB8
To be Published
2YU7
DownloadVisualize
BU of 2yu7 by Molmil
Solution structure of the SHP-1 C-terminal SH2 domain complexed with a tyrosine-phosphorylated peptide from NKG2A
Descriptor: Tyrosine-protein phosphatase non-receptor type 6, natural killer group 2A
Authors:Kasai, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2008-04-15
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of the SHP-1 C-terminal SH2 domain complexed with a tyrosine-phosphorylated peptide from NKG2A
To be Published
2YZN
DownloadVisualize
BU of 2yzn by Molmil
Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8.
Descriptor: D-alanine-D-alanine ligase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Kitamuta, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8
To be Published
2YUP
DownloadVisualize
BU of 2yup by Molmil
Solution structure of the second SH3 domain of human Vinexin
Descriptor: Vinexin
Authors:Abe, H, Tochio, N, Miyamoto, K, Saito, K, Sasagawa, A, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the second SH3 domain of human Vinexin
To be Published
1VCF
DownloadVisualize
BU of 1vcf by Molmil
Crystal Structure of IPP isomerase at I422
Descriptor: CADMIUM ION, FLAVIN MONONUCLEOTIDE, isopentenyl-diphosphate delta-isomerase
Authors:Wada, T, Park, S.-Y, Tame, R.H, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-08
Release date:2005-04-19
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of IPP isomerase at I422
To be Published
1VCE
DownloadVisualize
BU of 1vce by Molmil
Crystal structure of project ID PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
Authors:Kunishima, N, Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-07
Release date:2005-03-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
1V3W
DownloadVisualize
BU of 1v3w by Molmil
Structure of Ferripyochelin binding protein from Pyrococcus horikoshii OT3
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Jeyakanthan, J, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-07
Release date:2003-11-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Observation of a calcium-binding site in the gamma-class carbonic anhydrase from Pyrococcus horikoshii.
Acta Crystallogr.,Sect.D, 64, 2008
1V47
DownloadVisualize
BU of 1v47 by Molmil
Crystal structure of ATP sulfurylase from Thermus thermophillus HB8 in complex with APS
Descriptor: ADENOSINE-5'-PHOSPHOSULFATE, ATP sulfurylase, CHLORIDE ION, ...
Authors:Taguchi, Y, Sugishima, M, Fukuyama, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-11
Release date:2004-04-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structure of a novel zinc-binding ATP sulfurylase from Thermus thermophilus HB8
Biochemistry, 43, 2004
1V5V
DownloadVisualize
BU of 1v5v by Molmil
Crystal Structure of a Component of Glycine Cleavage System: T-protein from Pyrococcus horikoshii OT3 at 1.5 A Resolution
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, aminomethyltransferase
Authors:Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-26
Release date:2004-10-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a component of glycine cleavage system: T-protein from Pyrococcus horikoshii OT3 at 1.5 A resolution
Proteins, 58, 2004

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon