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3T0S
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BU of 3t0s by Molmil
Crystal structure of Pseudomonas aeruginosa OccK4 (OpdL)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, porin
Authors:van den Berg, B, Eren, E.
Deposit date:2011-07-20
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
3T20
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BU of 3t20 by Molmil
Crystal structure of Pseudomonas aeruginosa OccK5 (OpdH)
Descriptor: Cis-aconitate porin OpdH
Authors:van den Berg, B, Eren, E.
Deposit date:2011-07-22
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
3SY7
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BU of 3sy7 by Molmil
Improved crystal structure of Pseudomonas aeruginosa OprD
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Porin D
Authors:van den Berg, B, Eren, E.
Deposit date:2011-07-15
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
3SYS
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BU of 3sys by Molmil
Improved crystal structure of Pseudomonas aeruginosa OccK1 (OpdK)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 1,2-ETHANEDIOL, 4-HYDROXY-3-METHOXYBENZOATE, ...
Authors:van den Berg, B, Eren, E.
Deposit date:2011-07-18
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
3SZD
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BU of 3szd by Molmil
Crystal structure of Pseudomonas aeruginosa OccK2 (OpdF)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, SULFATE ION, ...
Authors:van den Berg, B, Eren, E.
Deposit date:2011-07-18
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.311 Å)
Cite:Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
3SYB
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BU of 3syb by Molmil
Crystal structure of Pseudomonas aeruginosa OccD3 (OpdP)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Glycine-glutamate dipeptide porin OpdP, SULFATE ION
Authors:van den Berg, B, Eren, E.
Deposit date:2011-07-16
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
3T24
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BU of 3t24 by Molmil
Crystal structure of Pseudomonas aeruginosa OpdQ
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, SULFATE ION, porin
Authors:van den Berg, B, Eren, E.
Deposit date:2011-07-22
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
5YQW
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BU of 5yqw by Molmil
Structure and function of a novel periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria
Descriptor: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NICKEL (II) ION, ...
Authors:Suginta, W, Sritho, N, Ranok, A, Kitaoku, Y, Bulmer, D.M, van den Berg, B, Fukamizo, T.
Deposit date:2017-11-08
Release date:2018-02-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Structure and function of a novel periplasmic chitooligosaccharide-binding protein from marineVibriobacteria.
J. Biol. Chem., 293, 2018
8BMX
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BU of 8bmx by Molmil
Bacteroides thetaiotaomicron B12 TonB dependent transporter in complex with a surface lipoprotein
Descriptor: Putative TonB-linked outer membrane receptor, YncE family protein
Authors:Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B.
Deposit date:2022-11-11
Release date:2023-09-20
Method:X-RAY DIFFRACTION (3.72 Å)
Cite:BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
7BIZ
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BU of 7biz by Molmil
Structure of a B12 binding lipoprotein from Bacteroides thetaiotaomicron
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CYANOCOBALAMIN, ...
Authors:Abellon-Ruiz, J, van den Berg, B.
Deposit date:2021-01-13
Release date:2022-03-02
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Gut Commensal Bacteroidetes Encode a Novel Class of Vitamin B 12 -Binding Proteins.
Mbio, 13, 2022
5FVN
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BU of 5fvn by Molmil
X-ray crystal structure of Enterobacter cloacae OmpE36 porin.
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 3-HYDROXY-TETRADECANOIC ACID, 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, ...
Authors:Arunmanee, W, Pathania, M, Soloyova, A, Brun, A, Ridley, H, Basle, A, van den Berg, B, Lakey, J.H.
Deposit date:2016-02-09
Release date:2016-08-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Gram-negative trimeric porins have specific LPS binding sites that are essential for porin biogenesis.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
7VU1
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BU of 7vu1 by Molmil
Chitoporin from Escherichia coli complex with chitohexaose
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitoporin, ...
Authors:Suginta, W, Soysa, H.S.M, Amornloetwattana, R, van den Berg, B.
Deposit date:2021-11-01
Release date:2022-11-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Chitporin from Escherichia coli complex with chitohexaose
To Be Published
8BYS
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BU of 8bys by Molmil
Outer membrane attachment porin OmpM1 from Veillonella parvula, native
Descriptor: S-layer homology domain-containing protein
Authors:Silale, A, van den Berg, B.
Deposit date:2022-12-13
Release date:2023-11-08
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes.
Nat Commun, 14, 2023
8BZ2
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BU of 8bz2 by Molmil
Crystal structure of outer membrane attachment porin OmpM1 SLH domain
Descriptor: S-layer homology domain-containing protein, SULFATE ION
Authors:Silale, A, van den Berg, B.
Deposit date:2022-12-14
Release date:2023-11-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes.
Nat Commun, 14, 2023
8BYT
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BU of 8byt by Molmil
Outer membrane attachment porin OmpM1 from Veillonella parvula, C3 symmetry
Descriptor: S-layer homology domain-containing protein
Authors:Silale, A, van den Berg, B.
Deposit date:2022-12-13
Release date:2023-11-08
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes.
Nat Commun, 14, 2023
8BYM
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BU of 8bym by Molmil
Outer membrane attachment porin OmpM1 from Veillonella parvula
Descriptor: S-layer homology domain-containing protein
Authors:Silale, A, van den Berg, B.
Deposit date:2022-12-13
Release date:2023-11-08
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes.
Nat Commun, 14, 2023
2R4L
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BU of 2r4l by Molmil
Crystal structure of the long-chain fatty acid transporter FadL mutant P34A
Descriptor: LAURYL DIMETHYLAMINE-N-OXIDE, Long-chain fatty acid transport protein
Authors:Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
Deposit date:2007-08-31
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Transmembrane passage of hydrophobic compounds through a protein channel wall
Nature, 458, 2009
2R4N
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BU of 2r4n by Molmil
Crystal structure of the long-chain fatty acid transporter FadL mutant N33A
Descriptor: LAURYL DIMETHYLAMINE-N-OXIDE, Long-chain fatty acid transport protein
Authors:Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
Deposit date:2007-08-31
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Transmembrane passage of hydrophobic compounds through a protein channel wall
Nature, 458, 2009
2R4P
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BU of 2r4p by Molmil
Crystal structure of the long-chain fatty acid transporter FadL mutant G212E
Descriptor: LAURYL DIMETHYLAMINE-N-OXIDE, Long-chain fatty acid transport protein
Authors:Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
Deposit date:2007-08-31
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Transmembrane passage of hydrophobic compounds through a protein channel wall
Nature, 458, 2009
2R4O
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BU of 2r4o by Molmil
Crystal structure of the long-chain fatty acid transporter FadL mutant delta NPA
Descriptor: LAURYL DIMETHYLAMINE-N-OXIDE, Long-chain fatty acid transport protein
Authors:Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
Deposit date:2007-08-31
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Transmembrane passage of hydrophobic compounds through a protein channel wall
Nature, 458, 2009
2R88
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BU of 2r88 by Molmil
Crystal structure of the long-chain fatty acid transporter FadL mutant delta S3 kink
Descriptor: Long-chain fatty acid transport protein
Authors:Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
Deposit date:2007-09-10
Release date:2008-09-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Transmembrane passage of hydrophobic compounds through a protein channel wall
Nature, 458, 2009
2R89
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BU of 2r89 by Molmil
Crystal structure of the long-chain fatty acid transporter FadL mutant delta N3
Descriptor: Long-chain fatty acid transport protein
Authors:Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
Deposit date:2007-09-10
Release date:2008-09-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:From the Cover: Ligand-gated diffusion across the bacterial outer membrane.
Proc.Natl.Acad.Sci.USA, 108, 2011
2R8A
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BU of 2r8a by Molmil
Crystal structure of the long-chain fatty acid transporter FadL mutant delta N8
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Long-chain fatty acid transport protein
Authors:Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
Deposit date:2007-09-10
Release date:2008-09-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:From the Cover: Ligand-gated diffusion across the bacterial outer membrane.
Proc.Natl.Acad.Sci.USA, 108, 2011
3BRZ
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BU of 3brz by Molmil
Crystal structure of the Pseudomonas putida toluene transporter TodX
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, TodX
Authors:Hearn, E.M, Patel, D.R, van den Berg, B.
Deposit date:2007-12-21
Release date:2008-06-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Outer-membrane transport of aromatic hydrocarbons as a first step in biodegradation.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BRY
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BU of 3bry by Molmil
Crystal structure of the Ralstonia pickettii toluene transporter TbuX
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, TbuX
Authors:Hearn, E.M, Patel, D.R, van den Berg, B.
Deposit date:2007-12-21
Release date:2008-06-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Outer-membrane transport of aromatic hydrocarbons as a first step in biodegradation.
Proc.Natl.Acad.Sci.Usa, 105, 2008

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