Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6A95
DownloadVisualize
BU of 6a95 by Molmil
Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana bound with tetrodotoxin and Dc1a
Descriptor: (1R,5R,6R,7R,9S,11S,12S,13S,14S)-3-amino-14-(hydroxymethyl)-8,10-dioxa-2,4-diazatetracyclo[7.3.1.1~7,11~.0~1,6~]tetradec-3-ene-5,9,12,13,14-pentol (non-preferred name), 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shen, H.Z, li, Z.Q, Jiang, Y, Pan, X.J, Wu, J.P, Cristofori-Armstrong, B, Smith, J.J, Chin, Y.K.Y, Lei, J.L, Zhou, Q, King, G.F, Yan, N.
Deposit date:2018-07-11
Release date:2018-08-08
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural basis for the modulation of voltage-gated sodium channels by animal toxins.
Science, 362, 2018
6A91
DownloadVisualize
BU of 6a91 by Molmil
Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana bound with saxitoxin and Dc1a
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shen, H.Z, li, Z.Q, Jiang, Y, Pan, X.J, Wu, J.P, Cristofori-Armstrong, B, Smith, J.J, Chin, Y.K.Y, Lei, J.L, Zhou, Q, King, G.F, Yan, N.
Deposit date:2018-07-11
Release date:2018-08-08
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis for the modulation of voltage-gated sodium channels by animal toxins.
Science, 362, 2018
9IJ1
DownloadVisualize
BU of 9ij1 by Molmil
Cryo-EM Structure of MILI-piRNA-target (22-nt, bilobed)
Descriptor: MAGNESIUM ION, Piwi-like protein 2, RNA (26-MER), ...
Authors:Li, Z.Q, Xu, Q.K, Wu, J.P, Shen, E.Z.
Deposit date:2024-06-21
Release date:2024-11-13
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into RNA cleavage by PIWI Argonaute.
Nature, 639, 2025
9IIY
DownloadVisualize
BU of 9iiy by Molmil
Cryo-EM Structure of EfPiwi-piRNA-target (25-nt, bilobed)
Descriptor: Piwi, RNA (5'-R(P*CP*GP*UP*CP*UP*AP*UP*AP*CP*AP*AP*CP*CP*GP*AP*UP*CP*AP*GP*CP*U)-3'), RNA (5'-R(P*UP*AP*GP*CP*AP*GP*AP*UP*CP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*AP*CP*G)-3')
Authors:Li, Z.Q, Xu, Q.K, Wu, J.P, Shen, E.Z.
Deposit date:2024-06-21
Release date:2024-11-13
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural insights into RNA cleavage by PIWI Argonaute.
Nature, 639, 2025
9IJ4
DownloadVisualize
BU of 9ij4 by Molmil
Cryo-EM Structure of MILI(K852A)-piRNA-target (26-nt)
Descriptor: MAGNESIUM ION, Piwi-like protein 2, RNA (25-MER), ...
Authors:Li, Z.Q, Xu, Q.K, Wu, J.P, Shen, E.Z.
Deposit date:2024-06-21
Release date:2025-01-22
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural insights into RNA cleavage by PIWI Argonaute.
Nature, 639, 2025
9IJ5
DownloadVisualize
BU of 9ij5 by Molmil
Cryo-EM Structure of MILI(K853A)-piRNA-target
Descriptor: MAGNESIUM ION, Piwi-like protein 2, RNA (25-MER), ...
Authors:Li, Z.Q, Xu, Q.K, Wu, J.P, Shen, E.Z.
Deposit date:2024-06-21
Release date:2024-11-13
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural insights into RNA cleavage by PIWI Argonaute.
Nature, 639, 2025
9IJ3
DownloadVisualize
BU of 9ij3 by Molmil
Cryo-EM Structure of MILI-piRNA-target (26-nt)
Descriptor: MANGANESE (II) ION, Piwi-like protein 2, RNA (25-MER), ...
Authors:Li, Z.Q, Xu, Q.K, Wu, J.P, Shen, E.Z.
Deposit date:2024-06-21
Release date:2024-11-13
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural insights into RNA cleavage by PIWI Argonaute.
Nature, 639, 2025
9IJ0
DownloadVisualize
BU of 9ij0 by Molmil
Cryo-EM Structure of MILI-piRNA-target (8-nt)
Descriptor: MAGNESIUM ION, Piwi-like protein 2, RNA (26-MER), ...
Authors:Li, Z.Q, Xu, Q.K, Wu, J.P, Shen, E.Z.
Deposit date:2024-06-21
Release date:2024-11-13
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into RNA cleavage by PIWI Argonaute.
Nature, 639, 2025
9IJ2
DownloadVisualize
BU of 9ij2 by Molmil
Cryo-EM Structure of MILI-piRNA-target (22-nt, comma)
Descriptor: Piwi-like protein 2, RNA (5'-R(P*CP*AP*AP*GP*UP*UP*UP*CP*CP*AP*UP*GP*UP*UP*GP*AP*UP*GP*GP*UP*A)-3'), RNA (5'-R(P*UP*UP*AP*CP*CP*AP*UP*CP*AP*AP*CP*AP*UP*GP*GP*AP*AP*AP*CP*UP*UP*G)-3')
Authors:Li, Z.Q, Xu, Q.K, Wu, J.P, Shen, E.Z.
Deposit date:2024-06-21
Release date:2024-11-13
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural insights into RNA cleavage by PIWI Argonaute.
Nature, 639, 2025
9IIZ
DownloadVisualize
BU of 9iiz by Molmil
Cryo-EM Structure of EfPiwi-piRNA-target (25-nt, comma)
Descriptor: Piwi, RNA (25-MER), RNA (5'-R(P*AP*GP*CP*CP*AP*AP*GP*UP*UP*UP*CP*CP*AP*UP*GP*UP*UP*GP*AP*UP*GP*GP*UP*A)-3')
Authors:Li, Z.Q, Xu, Q.K, Wu, J.P, Shen, E.Z.
Deposit date:2024-06-21
Release date:2024-11-13
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural insights into RNA cleavage by PIWI Argonaute.
Nature, 639, 2025
5GJQ
DownloadVisualize
BU of 5gjq by Molmil
Structure of the human 26S proteasome bound to USP14-UbAl
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
Authors:Huang, X.L, Luan, B, Wu, J.P, Shi, Y.G.
Deposit date:2016-07-01
Release date:2016-08-17
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (4.35 Å)
Cite:An atomic structure of the human 26S proteasome.
Nat. Struct. Mol. Biol., 23, 2016
5GJR
DownloadVisualize
BU of 5gjr by Molmil
An atomic structure of the human 26S proteasome
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
Authors:Huang, X.L, Luan, B, Wu, J.P, Shi, Y.G.
Deposit date:2016-07-01
Release date:2016-09-07
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:An atomic structure of the human 26S proteasome.
Nat. Struct. Mol. Biol., 23, 2016
5GPD
DownloadVisualize
BU of 5gpd by Molmil
Crystal structure of the binding domain of SREBP from fission yeast
Descriptor: Sterol regulatory element-binding protein 1
Authors:Gong, X, Qian, H.W, Wu, J.P, Yan, N.
Deposit date:2016-08-01
Release date:2016-11-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.501 Å)
Cite:Complex structure of the fission yeast SREBP-SCAP binding domains reveals an oligomeric organization
Cell Res., 26, 2016
6LTO
DownloadVisualize
BU of 6lto by Molmil
cryo-EM structure of full length human Pannexin1
Descriptor: Pannexin-1
Authors:Mou, L.Q, Ke, M, Xiao, Q.J, Wu, J.P, Deng, D.
Deposit date:2020-01-23
Release date:2020-05-13
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for gating mechanism of Pannexin 1 channel.
Cell Res., 30, 2020
5GXB
DownloadVisualize
BU of 5gxb by Molmil
crystal structure of a LacY/Nanobody complex
Descriptor: Lactose permease, nanobody
Authors:Jiang, X, Wu, J.P, Yan, N, Kaback, H.R.
Deposit date:2016-09-16
Release date:2016-10-26
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of a LacY-nanobody complex in a periplasmic-open conformation.
Proc.Natl.Acad.Sci.USA, 113, 2016
6N3I
DownloadVisualize
BU of 6n3i by Molmil
Crystal structure of a double Trp XylE mutants (G58W/L315W)
Descriptor: D-xylose transporter
Authors:Jiang, X, Wu, J.P, Yan, N.
Deposit date:2018-11-15
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.69 Å)
Cite:Engineered XylE as a tool for mechanistic investigation and ligand discovery of the glucose transporters GLUTs.
Cell Discov, 5, 2019
6LTN
DownloadVisualize
BU of 6ltn by Molmil
cryo-EM structure of C-terminal truncated human Pannexin1
Descriptor: Pannexin-1
Authors:Mou, L.Q, Ke, M, Xiao, Q.J, Wu, J.P, Deng, D.
Deposit date:2020-01-23
Release date:2020-05-13
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for gating mechanism of Pannexin 1 channel.
Cell Res., 30, 2020
5JNX
DownloadVisualize
BU of 5jnx by Molmil
The 6.6 A cryo-EM structure of the full-length human NPC1 in complex with the cleaved glycoprotein of Ebola virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein, ...
Authors:Gong, X, Qian, H.W, Zhou, X.H, Wu, J.P, Wan, T, Shi, Y, Gao, F, Zhou, Q, Yan, N.
Deposit date:2016-05-01
Release date:2016-06-15
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (6.56 Å)
Cite:Structural Insights into the Niemann-Pick C1 (NPC1)-Mediated Cholesterol Transfer and Ebola Infection
Cell, 165, 2016
3JCO
DownloadVisualize
BU of 3jco by Molmil
Structure of yeast 26S proteasome in M1 state derived from Titan dataset
Descriptor: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ...
Authors:Luan, B, Huang, X.L, Wu, J.P, Shi, Y.G, Wang, F.
Deposit date:2016-01-06
Release date:2016-06-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structure of an endogenous yeast 26S proteasome reveals two major conformational states.
Proc.Natl.Acad.Sci.USA, 113, 2016
2PZY
DownloadVisualize
BU of 2pzy by Molmil
Structure of MK2 Complexed with Compound 76
Descriptor: (4R)-N-[4-({[2-(DIMETHYLAMINO)ETHYL]AMINO}CARBONYL)-1,3-THIAZOL-2-YL]-4-METHYL-1-OXO-2,3,4,9-TETRAHYDRO-1H-BETA-CARBOLINE-6-CARBOXAMIDE, MAP kinase-activated protein kinase 2, STAUROSPORINE
Authors:White, A, Wu, J.P, Wang, J, Abeywardane, A, Andersen, D, Emmanuel, M, Gautschi, E, Goldberg, D.R, Kashem, M.A, Lukas, S, Mao, W, Martin, L, Morwick, T, Moss, N, Pargellis, C, Patel, U.R, Patnaude, L, Peet, G.W, Skow, D, Snow, R.J, Ward, Y, Werneburg, B.
Deposit date:2007-05-18
Release date:2007-07-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The discovery of carboline analogs as potent MAPKAP-K2 inhibitors
Bioorg.Med.Chem.Lett., 17, 2007
<123

 

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon