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3SY9
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BU of 3sy9 by Molmil
Crystal structure of Pseudomonas aeruginosa OccD2 (OpdC)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Histidine porin OpdC, octyl beta-D-glucopyranoside
Authors:van den Berg, B, Eren, E.
Deposit date:2011-07-16
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
3T0S
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BU of 3t0s by Molmil
Crystal structure of Pseudomonas aeruginosa OccK4 (OpdL)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, porin
Authors:van den Berg, B, Eren, E.
Deposit date:2011-07-20
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
3SY7
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BU of 3sy7 by Molmil
Improved crystal structure of Pseudomonas aeruginosa OprD
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Porin D
Authors:van den Berg, B, Eren, E.
Deposit date:2011-07-15
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
3T20
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BU of 3t20 by Molmil
Crystal structure of Pseudomonas aeruginosa OccK5 (OpdH)
Descriptor: Cis-aconitate porin OpdH
Authors:van den Berg, B, Eren, E.
Deposit date:2011-07-22
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
3SYS
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BU of 3sys by Molmil
Improved crystal structure of Pseudomonas aeruginosa OccK1 (OpdK)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 1,2-ETHANEDIOL, 4-HYDROXY-3-METHOXYBENZOATE, ...
Authors:van den Berg, B, Eren, E.
Deposit date:2011-07-18
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
3SZD
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BU of 3szd by Molmil
Crystal structure of Pseudomonas aeruginosa OccK2 (OpdF)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, SULFATE ION, ...
Authors:van den Berg, B, Eren, E.
Deposit date:2011-07-18
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.311 Å)
Cite:Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
4FMS
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BU of 4fms by Molmil
Crystal structure of Pseudomonas aeruginosa OccK2 (OpdF) in complex with glucuronate
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Probable porin, ...
Authors:van den Berg, B, Eren, E.
Deposit date:2012-06-18
Release date:2013-03-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Toward Understanding the Outer Membrane Uptake of Small Molecules by Pseudomonas aeruginosa.
J.Biol.Chem., 288, 2013
2R89
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BU of 2r89 by Molmil
Crystal structure of the long-chain fatty acid transporter FadL mutant delta N3
Descriptor: Long-chain fatty acid transport protein
Authors:Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
Deposit date:2007-09-10
Release date:2008-09-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:From the Cover: Ligand-gated diffusion across the bacterial outer membrane.
Proc.Natl.Acad.Sci.USA, 108, 2011
2R8A
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BU of 2r8a by Molmil
Crystal structure of the long-chain fatty acid transporter FadL mutant delta N8
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Long-chain fatty acid transport protein
Authors:Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
Deposit date:2007-09-10
Release date:2008-09-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:From the Cover: Ligand-gated diffusion across the bacterial outer membrane.
Proc.Natl.Acad.Sci.USA, 108, 2011
4FSO
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BU of 4fso by Molmil
Crystal Structure of Pseudomonas aeruginosa OccK10 (OpdN)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CALCIUM ION, Probable porin
Authors:Eren, E, van den Berg, B.
Deposit date:2012-06-27
Release date:2013-07-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal Structures of OccK Subfamily Proteins
To be Published
4FUV
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BU of 4fuv by Molmil
Crystal Structure of Acinetobacter baumannii CarO
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, SULFATE ION, porin protein associated with imipenem resistance
Authors:Eren, E, van den Berg, B.
Deposit date:2012-06-28
Release date:2013-07-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Outer membrane transport of amino acids and antibiotics by an 8-stranded b-barrel protein
To be Published
4FRX
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BU of 4frx by Molmil
Crystal Structure of Pseudomonas aeruginosa OccK8 (OprE)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Anaerobically-induced outer membrane porin OprE
Authors:Eren, E, van den Berg, B.
Deposit date:2012-06-26
Release date:2013-07-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structures of OccK Subfamily Proteins
To be Published
4FSP
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BU of 4fsp by Molmil
Crystal Structure of Pseudomonas aeruginosa OccK11 (OpdR)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Probable porin
Authors:Eren, E, van den Berg, B.
Deposit date:2012-06-27
Release date:2013-07-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.323 Å)
Cite:Crystal Structures of OccK Subfamily Proteins
To be Published
4FT6
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BU of 4ft6 by Molmil
Crystal Structure of Pseudomonas aeruginosa OccK9 (OpdG)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, DECYL-BETA-D-MALTOPYRANOSIDE, Probable porin
Authors:Eren, E, van den Berg, B.
Deposit date:2012-06-27
Release date:2013-07-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Crystal Structures of OccK Subfamily Proteins
To be Published
8BYM
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BU of 8bym by Molmil
Outer membrane attachment porin OmpM1 from Veillonella parvula
Descriptor: S-layer homology domain-containing protein
Authors:Silale, A, van den Berg, B.
Deposit date:2022-12-13
Release date:2023-11-08
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes.
Nat Commun, 14, 2023
8BYS
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BU of 8bys by Molmil
Outer membrane attachment porin OmpM1 from Veillonella parvula, native
Descriptor: S-layer homology domain-containing protein
Authors:Silale, A, van den Berg, B.
Deposit date:2022-12-13
Release date:2023-11-08
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes.
Nat Commun, 14, 2023
8BYT
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BU of 8byt by Molmil
Outer membrane attachment porin OmpM1 from Veillonella parvula, C3 symmetry
Descriptor: S-layer homology domain-containing protein
Authors:Silale, A, van den Berg, B.
Deposit date:2022-12-13
Release date:2023-11-08
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes.
Nat Commun, 14, 2023
8BZ2
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BU of 8bz2 by Molmil
Crystal structure of outer membrane attachment porin OmpM1 SLH domain
Descriptor: S-layer homology domain-containing protein, SULFATE ION
Authors:Silale, A, van den Berg, B.
Deposit date:2022-12-14
Release date:2023-11-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes.
Nat Commun, 14, 2023
5YQW
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BU of 5yqw by Molmil
Structure and function of a novel periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria
Descriptor: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NICKEL (II) ION, ...
Authors:Suginta, W, Sritho, N, Ranok, A, Kitaoku, Y, Bulmer, D.M, van den Berg, B, Fukamizo, T.
Deposit date:2017-11-08
Release date:2018-02-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Structure and function of a novel periplasmic chitooligosaccharide-binding protein from marineVibriobacteria.
J. Biol. Chem., 293, 2018
6ZLU
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BU of 6zlu by Molmil
Closed-closed state of the Bt1762-Bt1763 levan transport system
Descriptor: SusC homolog, SusD homolog
Authors:White, J.B.R, van den Berg, B, Ranson, N.A.
Deposit date:2020-07-01
Release date:2020-11-11
Last modified:2021-01-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Insights into SusCD-mediated glycan import by a prominent gut symbiont.
Nat Commun, 12, 2021
6ZM1
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BU of 6zm1 by Molmil
Open-closed state of the Bt1762-Bt1763 levan transport system
Descriptor: SusC homolog, SusD homolog
Authors:White, J.B.R, van den Berg, B, Ranson, N.A.
Deposit date:2020-07-01
Release date:2020-11-11
Last modified:2021-01-20
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Insights into SusCD-mediated glycan import by a prominent gut symbiont.
Nat Commun, 12, 2021
6ZLT
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BU of 6zlt by Molmil
Open-open state of the Bt1762-Bt1763 levan transport system
Descriptor: SusC homolog, SusD homolog
Authors:White, J.B.R, van den Berg, B, Ranson, N.A.
Deposit date:2020-07-01
Release date:2020-11-11
Last modified:2021-01-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Insights into SusCD-mediated glycan import by a prominent gut symbiont.
Nat Commun, 12, 2021
6Z8R
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BU of 6z8r by Molmil
Copper transporter OprC
Descriptor: COPPER (II) ION, Putative copper transport outer membrane porin OprC
Authors:Bhamidimarri, S.P, van den Berg, B.
Deposit date:2020-06-02
Release date:2021-06-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
6Z8U
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BU of 6z8u by Molmil
Copper transporter OprC
Descriptor: Putative copper transport outer membrane porin OprC, SILVER ION
Authors:Bhamidimarri, S.P, van den Berg, B.
Deposit date:2020-06-02
Release date:2021-06-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
6Z8S
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BU of 6z8s by Molmil
Copper transporter OprC
Descriptor: COPPER (I) ION, Putative copper transport outer membrane porin OprC
Authors:Bhamidimarri, S.P, van den Berg, B.
Deposit date:2020-06-02
Release date:2021-06-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021

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PDB entries from 2024-07-17

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