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4DPQ
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BU of 4dpq by Molmil
The structure of dihydrodipicolinate synthase 2 from Arabidopsis thaliana in complex with (S)-lysine
Descriptor: Dihydrodipicolinate synthase 2, chloroplastic, LYSINE, ...
Authors:Griffin, M.D.W, Billakanti, J.M, Gerrard, J.A, Dobson, R.C.J, Pearce, F.G.
Deposit date:2012-02-14
Release date:2012-07-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Characterisation of the first enzymes committed to lysine biosynthesis in Arabidopsis thaliana
Plos One, 7, 2012
4DPP
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BU of 4dpp by Molmil
The structure of dihydrodipicolinate synthase 2 from Arabidopsis thaliana
Descriptor: Dihydrodipicolinate synthase 2, chloroplastic, SODIUM ION
Authors:Griffin, M.D.W, Billakanti, J.M, Gerrard, J.A, Dobson, R.C.J, Pearce, F.G.
Deposit date:2012-02-14
Release date:2012-07-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characterisation of the first enzymes committed to lysine biosynthesis in Arabidopsis thaliana
Plos One, 7, 2012
4GRS
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BU of 4grs by Molmil
Crystal structure of a chimeric DAH7PS
Descriptor: Phospho-2-dehydro-3-deoxyheptonate aldolase, 2-dehydro-3-deoxyphosphoheptonate aldolase, TYROSINE
Authors:Cross, P.J, Allison, T.M, Dobson, R.C.J, Jameson, G.B, Parker, E.J.
Deposit date:2012-08-26
Release date:2013-02-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Engineering allosteric control to an unregulated enzyme by transfer of a regulatory domain
Proc.Natl.Acad.Sci.USA, 110, 2013
4I7W
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BU of 4i7w by Molmil
Agrobacterium tumefaciens DHDPS with lysine and pyruvate
Descriptor: Dihydrodipicolinate synthase, GLYCEROL, LYSINE
Authors:Atkinson, S.C, Dogovski, C, Dobson, R.C.J, Perugini, M.A.
Deposit date:2012-12-01
Release date:2013-12-04
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure, function and allostery of the bona fide DHDPS from the plant pathogen Agrobacterium tumefaciens
To be Published
4I7V
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BU of 4i7v by Molmil
Agrobacterium tumefaciens DHDPS with pyruvate
Descriptor: Dihydrodipicolinate synthase
Authors:Atkinson, S.C, Dogovski, C, Dobson, R.C.J, Perugini, M.A.
Deposit date:2012-12-01
Release date:2013-12-04
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure, function and allostery of the bona fide DHDPS from the plant pathogen Agrobacterium tumefaciens
To be Published
7LOY
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BU of 7loy by Molmil
Dihydrodipicolinate synthase with pyruvate from Candidatus Liberibacter solanacearum
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase
Authors:Gilkes, J.M, Frampton, R.A, Board, A, Sheen, C.R, Smith, G.R, Dobson, R.C.J.
Deposit date:2021-02-11
Release date:2021-03-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Dihydrodipicolinate synthase with pyruvate from the plant pathogen, Candidatus Liberibacter solanacearum
To Be Published
7JZE
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BU of 7jze by Molmil
Dihydrodipicolinate synthase mutant S48W
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, POTASSIUM ION
Authors:Board, A.J, Dobson, R.C.J.
Deposit date:2020-09-02
Release date:2021-09-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mapping the uncharted water channel of DHDPS
To Be Published
7JZ8
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BU of 7jz8 by Molmil
Dihydrodipicolinate synthase mutant S48F with lysine in the allosteric site
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, LYSINE, POTASSIUM ION
Authors:Board, A.J, Dobson, R.C.J.
Deposit date:2020-09-01
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Mapping the unchartered waters of dihydrodipicolinate synthase: a novel mechanism of allosteric inhibition.
To Be Published
7JZ7
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BU of 7jz7 by Molmil
Dihydrodipicolinate synthase mutant S48F
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, POTASSIUM ION
Authors:Board, A.J, Dobson, R.C.J.
Deposit date:2020-09-01
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Mapping the unchartered waters of dihydrodipicolinate synthase: a novel mechanism of allosteric inhibition.
To Be Published
7JZB
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BU of 7jzb by Molmil
Dihydrodipicolinate synthase S48W with lysine in the allosteric site, and pyruvate and succinic semi-aldehyde
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, LYSINE, POTASSIUM ION
Authors:Board, A.J, Dobson, R.C.J.
Deposit date:2020-09-01
Release date:2021-09-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Mapping the uncharted water channel of DHDPS
To Be Published
7JZC
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BU of 7jzc by Molmil
Dihydrodipicolinate synthase S48W mutant with lysine in the allosteric site, and pyruvate in the catalytic site
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, POTASSIUM ION
Authors:Board, A.J, Dobson, R.C.J.
Deposit date:2020-09-02
Release date:2021-09-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Mapping the uncharted water channel of DHDPS
To Be Published
7JZD
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BU of 7jzd by Molmil
Dihydrodipicolinate synthase mutation S48W with Lysine in the allosteric site
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, POTASSIUM ION
Authors:Board, A.J, Dobson, R.C.J.
Deposit date:2020-09-02
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Mapping the uncharted water channel of DHDPS
To Be Published
7JZG
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BU of 7jzg by Molmil
Dihydrodipicolinate synthase mutant S48F with lysine in the allosteric site and pyruvate in the catalytic site
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, LYSINE, ...
Authors:Board, A.J, Dobson, R.C.J.
Deposit date:2020-09-02
Release date:2021-09-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Mapping the uncharted water channel of DHDPS
To Be Published
7JZA
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BU of 7jza by Molmil
Dihydrodipicolinate synthase S48F mutant with lysine in the allosteric site, and pyruvate and succinic semi-aldehyde in the catalytic site
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, LYSINE, ...
Authors:Board, A.J, Dobson, R.C.J.
Deposit date:2020-09-01
Release date:2021-09-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Mapping the uncharted water channel of DHDPS
To Be Published
7JZF
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BU of 7jzf by Molmil
Dihydrodipicolinate synthase mutant S48F with pyruvate in the catalytic site
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, POTASSIUM ION
Authors:Board, A.J, Dobson, R.C.J.
Deposit date:2020-09-02
Release date:2021-09-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Mapping the uncharted water channel of DHDPS
To Be Published
7JZ9
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BU of 7jz9 by Molmil
Dihydrodipicolinate synthase S48F with pyruvate and succinic semi-aldehyde
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, POTASSIUM ION
Authors:Board, A.J, Dobson, R.C.J.
Deposit date:2020-09-01
Release date:2021-09-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Mapping the uncharted water channel of DHDPS
To Be Published
7LVL
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BU of 7lvl by Molmil
Dihydrodipicolinate synthase bound with allosteric inhibitor (S)-lysine from Candidatus Liberibacter solanacearum
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, LYSINE
Authors:Gilkes, J.M, Frampton, R.A, Board, A.J, Sheen, C.R, Smith, G.R, Dobson, R.C.J.D.
Deposit date:2021-02-25
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Dihydrodipicolinate synthase bound with allosteric inhibitor (S)-lysine from Candidatus Liberibacter solanacearum
To Be Published
1YXD
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BU of 1yxd by Molmil
Structure of E. coli dihydrodipicolinate synthase bound with allosteric inhibitor (S)-lysine to 2.0 A
Descriptor: CHLORIDE ION, LYSINE, POTASSIUM ION, ...
Authors:Dobson, R.C.J, Griffin, M.D.W, Jameson, G.B, Gerrard, J.A.
Deposit date:2005-02-20
Release date:2005-08-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structures of native and (S)-lysine-bound dihydrodipicolinate synthase from Escherichia coli with improved resolution show new features of biological significance.
Acta Crystallogr.,Sect.D, 61, 2005
1YXC
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BU of 1yxc by Molmil
Structure of E. coli dihydrodipicolinate synthase to 1.9 A
Descriptor: CHLORIDE ION, POTASSIUM ION, dihydrodipicolinate synthase
Authors:Dobson, R.C.J, Griffin, M.D.W, Jameson, G.B, Gerrard, J.A.
Deposit date:2005-02-20
Release date:2005-08-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structures of native and (S)-lysine-bound dihydrodipicolinate synthase from Escherichia coli with improved resolution show new features of biological significance.
Acta Crystallogr.,Sect.D, 61, 2005
3DU0
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BU of 3du0 by Molmil
E. coli dihydrodipicolinate synthase with first substrate, pyruvate, bound in active site
Descriptor: CHLORIDE ION, Dihydrodipicolinate synthase, GLYCEROL, ...
Authors:Dobson, R.C.J, Devenish, S.R.A, Gerrard, J.A, Jameson, G.B.
Deposit date:2008-07-16
Release date:2008-11-18
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:The high-resolution structure of dihydrodipicolinate synthase from Escherichia coli bound to its first substrate, pyruvate.
Acta Crystallogr.,Sect.F, 64, 2008
2PUR
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BU of 2pur by Molmil
Structure of dihydrodipicolinate synthase mutant Thr44Ser at 1.7 A.
Descriptor: Dihydrodipicolinate synthase, GLYCEROL, PHOSPHATE ION, ...
Authors:Dobson, R.C.J, Jameson, G.B, Gerrard, J.A.
Deposit date:2007-05-09
Release date:2008-05-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Specificity versus catalytic potency: The role of threonine 44 in Escherichia coli dihydrodipicolinate synthase mediated catalysis.
Biochimie, 91, 2009
3I7Q
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BU of 3i7q by Molmil
Dihydrodipicolinate synthase mutant - K161A
Descriptor: Dihydrodipicolinate synthase, GLYCEROL, PHOSPHATE ION, ...
Authors:Dobson, R.C.J, Jameson, G.B, Gerrard, J.A, Soares da Costa, T.P.
Deposit date:2009-07-08
Release date:2010-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:How essential is the 'essential' active-site lysine in dihydrodipicolinate synthase?
Biochimie, 92, 2010
3I7R
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BU of 3i7r by Molmil
Dihydrodipicolinate synthase - K161R
Descriptor: CHLORIDE ION, Dihydrodipicolinate synthase, GLYCEROL, ...
Authors:Dobson, R.C.J, Jameson, G.B, Gerrard, J.A, Soares da Costa, T.P.
Deposit date:2009-07-08
Release date:2010-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:How essential is the 'essential' active-site lysine in dihydrodipicolinate synthase?
Biochimie, 92, 2010
3I7S
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BU of 3i7s by Molmil
Dihydrodipicolinate synthase mutant - K161A - with the substrate pyruvate bound in the active site.
Descriptor: Dihydrodipicolinate synthase, GLYCEROL, PHOSPHATE ION, ...
Authors:Dobson, R.C.J, Jameson, G.B, Gerrard, J.A, Soares da Costa, T.P.
Deposit date:2009-07-08
Release date:2010-04-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:How essential is the 'essential' active-site lysine in dihydrodipicolinate synthase?
Biochimie, 92, 2010
6E8L
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BU of 6e8l by Molmil
Crystal Structure of Alkyl hydroperoxidase D (AhpD) from Streptococcus pneumoniae (Strain D39/ NCTC 7466)
Descriptor: Alkyl hydroperoxide reductase AhpD
Authors:Meng, Y, Davies, J, North, R, Coombes, D, Horne, C, Hampton, M, Dobson, R.
Deposit date:2018-07-30
Release date:2019-08-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-function analyses of alkylhydroperoxidase D fromStreptococcus pneumoniaereveal an unusual three-cysteine active site architecture.
J.Biol.Chem., 295, 2020

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