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2NMT
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BU of 2nmt by Molmil
MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE BOUND TO MYRISTOYL-COA AND PEPTIDE ANALOGS
Descriptor: GLYCEROL, MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE, S-(2-OXO)PENTADECYLCOA, ...
Authors:Fuetterer, K, Bhatnagar, R.S, Waksman, G.
Deposit date:1998-07-14
Release date:1999-01-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of N-myristoyltransferase with bound myristoylCoA and peptide substrate analogs.
Nat.Struct.Biol., 5, 1998
2OFQ
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BU of 2ofq by Molmil
NMR Solution Structure of a complex between the VirB9/VirB7 interaction domains of the pKM101 type IV secretion system
Descriptor: TraN, TraO
Authors:Harris, R, Bayliss, R, Driscoll, P.C, Waksman, G.
Deposit date:2007-01-04
Release date:2007-01-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structure of a complex between the VirB9/VirB7 interaction domains of the pKM101 type IV secretion system
Proc.Natl.Acad.Sci.Usa, 104, 2007
2PT7
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BU of 2pt7 by Molmil
Crystal structure of Cag VirB11 (HP0525) and an inhibitory protein (HP1451)
Descriptor: Cag-alfa, Hypothetical protein
Authors:Hare, S, Fischer, W, Williams, R, Terradot, L, Bayliss, R, Haas, R, Waksman, G.
Deposit date:2007-05-08
Release date:2007-11-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Identification, structure and mode of action of a new regulator of the Helicobacter pylori HP0525 ATPase.
Embo J., 26, 2007
3U4K
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BU of 3u4k by Molmil
Crystal structure of the receptor binding domain of plasmid-born adhesin MrkD1P of Klebsiella pneumoniae
Descriptor: Fimbria adhesin protein
Authors:Rego, A.T, Waksman, G.
Deposit date:2011-10-09
Release date:2012-09-26
Last modified:2013-07-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the MrkD1P receptor binding domain of Klebsiella pneumoniae and identification of the human collagen V binding interface.
Mol.Microbiol., 86, 2012
3CRF
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BU of 3crf by Molmil
Electron Microscopy model of the Saf Pilus- Type B
Descriptor: Outer membrane protein
Authors:Salih, O, Remaut, H, Waksman, G, Orlova, E.V.
Deposit date:2008-04-07
Release date:2008-05-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (17 Å)
Cite:Structural analysis of the Saf pilus by electron microscopy and image processing.
J.Mol.Biol., 379, 2008
3JQO
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BU of 3jqo by Molmil
Crystal structure of the outer membrane complex of a type IV secretion system
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, LAURYL DIMETHYLAMINE-N-OXIDE, TraF protein, ...
Authors:Chandran, V, Fronzes, R, Duquerroy, S, Cronin, N, Navaza, J, Waksman, G.
Deposit date:2009-09-07
Release date:2009-12-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the outer membrane complex of a type IV secretion system
Nature, 462, 2009
3KTQ
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BU of 3ktq by Molmil
CRYSTAL STRUCTURE OF AN ACTIVE TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS
Descriptor: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA (5'-D(*AP*GP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*DOC)-3'), ...
Authors:Li, Y, Waksman, G.
Deposit date:1998-07-28
Release date:1999-01-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: structural basis for nucleotide incorporation.
EMBO J., 17, 1998
3LFU
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BU of 3lfu by Molmil
Crystal Structure of E. coli UvrD
Descriptor: DNA helicase II, SULFATE ION
Authors:Korolev, S, Waksman, G, Lohman, T.M.
Deposit date:2010-01-18
Release date:2011-02-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rotations of the 2B sub-domain of E. coli UvrD helicase/translocase coupled to nucleotide and DNA binding.
J.Mol.Biol., 411, 2011
4AG6
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BU of 4ag6 by Molmil
Structure of VirB4 of Thermoanaerobacter pseudethanolicus
Descriptor: SULFATE ION, TYPE IV SECRETORY PATHWAY VIRB4 COMPONENTS-LIKE PROTEIN
Authors:Wallden, K, Williams, R, Yan, J, Lian, P.W, Wang, L, Thalassinos, K, Orlova, E.V, Waksman, G.
Deposit date:2012-01-24
Release date:2012-07-04
Last modified:2012-07-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of the Virb4 ATPase, Alone and Bound to the Core Complex of a Type Iv Secretion System.
Proc.Natl.Acad.Sci.USA, 109, 2012
4AG5
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BU of 4ag5 by Molmil
Structure of VirB4 of Thermoanaerobacter pseudethanolicus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Wallden, K, Williams, R, Yan, J, Lian, P.W, Wang, L, Thalassinos, K, Orlova, E.V, Waksman, G.
Deposit date:2012-01-24
Release date:2012-07-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of the Virb4 ATPase, Alone and Bound to the Core Complex of a Type Iv Secretion System.
Proc.Natl.Acad.Sci.USA, 109, 2012
3ZBJ
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BU of 3zbj by Molmil
Fitting results in the I-layer of the subnanometer structure of the bacterial pKM101 type IV secretion system core complex digested with elastase
Descriptor: TRAO PROTEIN
Authors:Rivera-Calzada, A, Fronzes, R, Savva, C.G, Chandran, V, Lian, P.W, Laeremans, T, Pardon, E, Steyaert, J, Remaut, H, Waksman, G, Orlova, E.V.
Deposit date:2012-11-10
Release date:2013-04-03
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8.5 Å)
Cite:Structure of a Bacterial Type Iv Secretion Core Complex at Subnanometre Resolution.
Embo J., 32, 2013
2GR7
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BU of 2gr7 by Molmil
Hia 992-1098
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Adhesin
Authors:Meng, G, Waksman, G.
Deposit date:2006-04-23
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the outer membrane translocator domain of the Haemophilus influenzae Hia trimeric autotransporter.
Embo J., 25, 2006
2W07
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BU of 2w07 by Molmil
Structural determinants of polymerization reactivity of the P pilus adaptor subunit PapF
Descriptor: CHAPERONE PROTEIN PAPD, MINOR PILIN SUBUNIT PAPF, SULFATE ION
Authors:Verger, D, Rose, R.J, Paci, E, Costakes, G, Daviter, T, Hultgren, S, Remaut, H, Ashcroft, A.E, Radford, S.E, Waksman, G.
Deposit date:2008-08-12
Release date:2008-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Determinants of Polymerization Reactivity of the P Pilus Adaptor Subunit Papf.
Structure, 16, 2008
2XG5
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BU of 2xg5 by Molmil
E. coli P pilus chaperone-subunit complex PapD-PapH bound to pilus biogenesis inhibitor, pilicide 5d
Descriptor: (2R)-2-[5-CYCLOPROPYL-6-(HYDROXYSULFANYL)-4-(NAPHTHALEN-1-YLMETHYL)-2-OXOPYRIDIN-1(2H)-YL]-3-PHENYLPROPANOIC ACID, (2R,3R)-8-CYCLOPROPYL-7-(NAPHTHALEN-1-YLMETHYL)-5-OXO-2-PHENYL-2,3-DIHYDRO-5H-[1,3]THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACID, CHAPERONE PROTEIN PAPD, ...
Authors:Remaut, H, Phan, G, Buelens, F, Chorell, E, Pinkner, J.S, Edvinsson, S, Almqvist, F, Hultgren, S.J, Waksman, G.
Deposit date:2010-05-30
Release date:2010-07-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design and Synthesis of C-2 Substituted Thiazolo and Dihydrothiazolo Ring-Fused 2-Pyridones: Pilicides with Increased Antivirulence Activity.
J.Med.Chem., 53, 2010
2XG4
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BU of 2xg4 by Molmil
E. coli P pilus chaperone-subunit complex PapD-PapH bound to pilus biogenesis inhibitor, pilicide 2c
Descriptor: (3R)-8-CYCLOPROPYL-6-(MORPHOLIN-4-YLMETHYL)-7-(1-NAPHTHYLMETHYL)-5-OXO-2,3-DIHYDRO-5H-[1,3]THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACID, CHAPERONE PROTEIN PAPD, COBALT (II) ION, ...
Authors:Remaut, H, Phan, G, Buelens, F, Chorell, E, Pinkner, J.S, Edvinsson, S, Almqvist, F, Hultgren, S.J, Waksman, G.
Deposit date:2010-05-30
Release date:2010-07-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Design and Synthesis of C-2 Substituted Thiazolo and Dihydrothiazolo Ring-Fused 2-Pyridones: Pilicides with Increased Antivirulence Activity.
J.Med.Chem., 53, 2010
3EMO
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BU of 3emo by Molmil
Crystal structure of transmembrane Hia 973-1098
Descriptor: Hia (Adhesin)
Authors:Meng, G, Waksman, G.
Deposit date:2008-09-24
Release date:2008-11-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Repetitive Architecture of the Haemophilus influenzae Hia Trimeric Autotransporter
J.Mol.Biol., 384, 2008
3EMI
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BU of 3emi by Molmil
Crystal structure of Hia 307-422 non-adhesive domain
Descriptor: Hia (Adhesin)
Authors:Meng, G, Waksman, G.
Deposit date:2008-09-24
Release date:2008-11-04
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Repetitive Architecture of the Haemophilus influenzae Hia Trimeric Autotransporter
J.Mol.Biol., 384, 2008
3EMF
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BU of 3emf by Molmil
Crystal structure of Haemophilus influenzae HiaBD2
Descriptor: Hia (Adhesin)
Authors:Meng, G, Waksman, G.
Deposit date:2008-09-24
Release date:2008-11-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Repetitive Architecture of the Haemophilus influenzae Hia Trimeric Autotransporter
J.Mol.Biol., 384, 2008
2GR8
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BU of 2gr8 by Molmil
Hia 1022-1098
Descriptor: Adhesin
Authors:Meng, G, Waksman, G.
Deposit date:2006-04-23
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the outer membrane translocator domain of the Haemophilus influenzae Hia trimeric autotransporter.
Embo J., 25, 2006
5N8O
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BU of 5n8o by Molmil
Cryo EM structure of the conjugative relaxase TraI of the F/R1 plasmid system
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA helicase I
Authors:Ilangovan, A, Zanetti, G, Waksman, G.
Deposit date:2017-02-23
Release date:2017-05-03
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM Structure of a Relaxase Reveals the Molecular Basis of DNA Unwinding during Bacterial Conjugation
Cell, 169, 2017
1KA8
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BU of 1ka8 by Molmil
Crystal Structure of the Phage P4 Origin-Binding Domain
Descriptor: putative P4-specific DNA primase
Authors:Yeo, H.J, Ziegelin, G, Korolev, S, Calendar, R, Lanka, E, Waksman, G.
Deposit date:2001-10-31
Release date:2002-04-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Phage P4 origin-binding domain structure reveals a mechanism for regulation of DNA-binding activity by homo- and heterodimerization of winged helix proteins.
Mol.Microbiol., 43, 2002
7OVB
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BU of 7ovb by Molmil
L. pneumophila Type IV Coupling Complex (T4CC) with density for DotY N-terminal and middle domains
Descriptor: DotY, DotZ, IcmJ (DotN), ...
Authors:Mace, K, Meir, A, Lukoyanova, N, Waksman, G.
Deposit date:2021-06-14
Release date:2021-12-01
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:Proteins DotY and DotZ modulate the dynamics and localization of the type IVB coupling complex of Legionella pneumophila.
Mol.Microbiol., 117, 2022
1J8S
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BU of 1j8s by Molmil
PAPG ADHESIN RECEPTOR BINDING DOMAIN-UNBOUND FORM
Descriptor: PYELONEPHRITIC ADHESIN
Authors:Dodson, K.W, Pinkner, J.S, Rose, T, Magnusson, G, Hultgren, S.J, Waksman, G.
Deposit date:2001-05-22
Release date:2001-06-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of the interaction of the pyelonephritic E. coli adhesin to its human kidney receptor.
Cell(Cambridge,Mass.), 105, 2001
5OH0
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BU of 5oh0 by Molmil
The Cryo-Electron Microscopy Structure of the Type 1 Chaperone-Usher Pilus Rod
Descriptor: Type-1 fimbrial protein, A chain
Authors:Hospenthal, M.K, Costa, T.R.D, Redzej, A, Waksman, G.
Deposit date:2017-07-13
Release date:2017-11-22
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:The Cryoelectron Microscopy Structure of the Type 1 Chaperone-Usher Pilus Rod.
Structure, 25, 2017
2J7L
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BU of 2j7l by Molmil
E. coli P Pilus chaperone PapD in complex with a pilus biogenesis inhibitor, pilicide 2c
Descriptor: (3R)-8-CYCLOPROPYL-6-(MORPHOLIN-4-YLMETHYL)-7-(1-NAPHTHYLMETHYL)-5-OXO-2,3-DIHYDRO-5H-[1,3]THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACID, CHAPERONE PROTEIN PAPD
Authors:Remaut, H, Pinkner, J.S, Hultgren, S.J, Almqvist, F, Waksman, G.
Deposit date:2006-10-12
Release date:2006-11-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Rationally Designed Small Compounds Inhibit Pilus Biogenesis in Uropathogenic Bacteria.
Proc.Natl.Acad.Sci.USA, 103, 2006

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