Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5LZF
DownloadVisualize
BU of 5lzf by Molmil
Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
Deposit date:2016-09-29
Release date:2016-11-23
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
7OPE
DownloadVisualize
BU of 7ope by Molmil
RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)
Descriptor: 23S rRNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
Authors:Crowe-McAuliffe, C, Wilson, D.N.
Deposit date:2021-05-31
Release date:2021-07-21
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:RqcH and RqcP catalyze processive poly-alanine synthesis in a reconstituted ribosome-associated quality control system.
Nucleic Acids Res., 49, 2021
8QQH
DownloadVisualize
BU of 8qqh by Molmil
Structure of beta-galactosidase from Desulfurococcus amyloliticus
Descriptor: Beta-galactosidase
Authors:Samygina, V.R, Kil, Y, Sergeev, R.S, Rychkov, G.N.
Deposit date:2023-10-04
Release date:2024-08-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The archaeal highly thermostable GH35 family beta-galactosidase Da beta Gal has a unique seven domain protein fold.
Febs J., 291, 2024
4BF9
DownloadVisualize
BU of 4bf9 by Molmil
Crystal structure of E. coli dihydrouridine synthase C (DusC) (selenomethionine derivative)
Descriptor: FLAVIN MONONUCLEOTIDE, TRNA-DIHYDROURIDINE SYNTHASE C
Authors:Byrne, R.T, Whelan, F, Konevega, A, Aziz, N, Rodnina, M, Antson, A.A.
Deposit date:2013-03-16
Release date:2013-11-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Major Reorientation of tRNA Substrates Defines Specificity of Dihydrouridine Synthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
4BFA
DownloadVisualize
BU of 4bfa by Molmil
Crystal structure of E. coli dihydrouridine synthase C (DusC)
Descriptor: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, NITRATE ION, ...
Authors:Byrne, R.T, Whelan, F, Konevega, A, Aziz, N, Rodnina, M, Antson, A.A.
Deposit date:2013-03-16
Release date:2013-11-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Major Reorientation of tRNA Substrates Defines Specificity of Dihydrouridine Synthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
8EKC
DownloadVisualize
BU of 8ekc by Molmil
Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Rybak, M.Y, Gagnon, M.G.
Deposit date:2022-09-20
Release date:2022-12-07
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Insights into the molecular mechanism of translation inhibition by the ribosome-targeting antibiotic thermorubin.
Nucleic Acids Res., 51, 2023
8EKB
DownloadVisualize
BU of 8ekb by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolution
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Paranjpe, M.N, Polikanov, Y.S.
Deposit date:2022-09-20
Release date:2022-12-21
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Insights into the molecular mechanism of translation inhibition by the ribosome-targeting antibiotic thermorubin.
Nucleic Acids Res., 51, 2023
<12

 

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon