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2GS9
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BU of 2gs9 by Molmil
Crystal structure of TT1324 from Thermus thermophilis HB8
Descriptor: FORMIC ACID, Hypothetical protein TT1324, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Kamitori, S, Abe, A, Ebihara, A, Kanagawa, M, Nakagawa, N, Kuroishi, C, Agari, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-25
Release date:2007-03-13
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of TT1324 from Thermus thermophilis HB8
To be Published
1JI1
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BU of 1ji1 by Molmil
Crystal Structure Analysis of Thermoactinomyces vulgaris R-47 alpha-Amylase 1
Descriptor: ALPHA-AMYLASE I, CALCIUM ION
Authors:Kamitori, S, Abe, A, Ohtaki, A, Kaji, A, Tonozuka, T, Sakano, Y.
Deposit date:2001-06-28
Release date:2002-06-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures and structural comparison of Thermoactinomyces vulgaris R-47 alpha-amylase 1 (TVAI) at 1.6 A resolution and alpha-amylase 2 (TVAII) at 2.3 A resolution.
J.Mol.Biol., 318, 2002
1IZE
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BU of 1ize by Molmil
Crystal structure of Aspergillus oryzae Aspartic proteinase complexed with pepstatin
Descriptor: Pepstatin, alpha-D-mannopyranose, aspartic proteinase
Authors:Kamitori, S, Ohtaki, A, Ino, H, Takeuchi, M.
Deposit date:2002-10-02
Release date:2003-03-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of Aspergillus oryzae aspartic proteinase and its complex with an inhibitor pepstatin at 1.9A resolution.
J.Mol.Biol., 326, 2003
1IZD
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BU of 1izd by Molmil
Crystal structure of Aspergillus oryzae Aspartic Proteinase
Descriptor: Aspartic proteinase, alpha-D-mannopyranose
Authors:Kamitori, S, Ohtaki, A, Ino, H, Takeuchi, M.
Deposit date:2002-10-02
Release date:2003-03-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structures of Aspergillus oryzae Aspartic Proteinase and its Complex with an Inhibitor Pepstatin at 1.9 A Resolution
J.Mol.Biol., 326, 2003
2EIS
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BU of 2eis by Molmil
X-ray structure of acyl-CoA hydrolase-like protein, TT1379, from Thermus thermophilus HB8
Descriptor: COENZYME A, Hypothetical protein TTHB207
Authors:Kamitori, S, Yoshida, H, Satoh, S, Iino, H, Ebihara, A, Chen, L, Fu, Z.-Q, Chrzas, J, Wang, B.-C, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-13
Release date:2008-03-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structure of acyl-CoA hydrolase-like protein, TT1379, from Thermus thermophilus HB8
To be Published
3WGP
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BU of 3wgp by Molmil
Crystal Structure Analysis of Vitamin D receptor
Descriptor: (1R,2R,3R,5Z,7E,14beta,17alpha)-2-(3-hydroxypropoxy)-9,10-secocholesta-5,7,10-triene-1,3,25-triol, Vitamin D3 receptor
Authors:Itoh, S, Iijima, S.
Deposit date:2013-08-07
Release date:2014-08-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure Analysis of Vitamin D receptor
to be published
8YJ7
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BU of 8yj7 by Molmil
Characerization of a novel format scFvXVHH single-chain Biparatopic antibody against a metal binding protein, MtsA
Descriptor: Iron ABC transporter substrate-binding lipoprotein MtsA, ZINC ION, scFv13
Authors:Ito, S, Nagatoishi, S, Nakakido, M, Tsumoto, K.
Deposit date:2024-03-01
Release date:2024-06-19
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Characterization of a novel format scFv×VHH single-chain biparatopic antibody against metal binding protein MtsA.
Protein Sci., 33, 2024
8YJ8
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BU of 8yj8 by Molmil
Characerization of a novel format scFvXVHH single-chain Biparatopic antibody against a metal binding protein, MtsA
Descriptor: Iron ABC transporter substrate-binding lipoprotein MtsA, VHH43, ZINC ION
Authors:Ito, S, Nagatoishi, S, Nakakido, M, Tsumoto, K.
Deposit date:2024-03-01
Release date:2024-06-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Characterization of a novel format scFv×VHH single-chain biparatopic antibody against metal binding protein MtsA.
Protein Sci., 33, 2024
8YJ5
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BU of 8yj5 by Molmil
Characerization of a novel format scFvXVHH single-chain Biparatopic antibody against a metal binding protein, MtsA
Descriptor: Iron ABC transporter substrate-binding lipoprotein MtsA, VHH43
Authors:Ito, S, Nagatoishi, S, Nakakido, M, Tsumoto, K.
Deposit date:2024-03-01
Release date:2024-06-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.66 Å)
Cite:Characterization of a novel format scFv×VHH single-chain biparatopic antibody against metal binding protein MtsA.
Protein Sci., 33, 2024
8YJ6
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BU of 8yj6 by Molmil
Characerization of a novel format scFvXVHH single-chain Biparatopic antibody against a metal binding protein, MtsA
Descriptor: Iron ABC transporter substrate-binding lipoprotein MtsA, ZINC ION
Authors:Ito, S, Nagatoishi, S, Nakakido, M, Tsumoto, K.
Deposit date:2024-03-01
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Characterization of a novel format scFv×VHH single-chain biparatopic antibody against metal binding protein MtsA.
Protein Sci., 33, 2024
1IT9
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BU of 1it9 by Molmil
CRYSTAL STRUCTURE OF AN ANTIGEN-BINDING FRAGMENT FROM A HUMANIZED VERSION OF THE ANTI-HUMAN FAS ANTIBODY HFE7A
Descriptor: HUMANIZED ANTIBODY HFE7A, HEAVY CHAIN, LIGHT CHAIN
Authors:Ito, S, Takayama, T, Hanzawa, H, Takahashi, T, Miyadai, K, Serizawa, N, Hata, T, Haruyama, H.
Deposit date:2002-01-11
Release date:2003-02-25
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Humanization of the Mouse Anti-Fas Antibody HFE7A and Crystal Structure of the Humanized HFE7A Fab Fragment
BIOL.PHARM.BULL., 25, 2002
3AZ1
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BU of 3az1 by Molmil
Crystal Structure Analysis of Vitamin D receptor
Descriptor: Vitamin D3 receptor, {4-[3-(4-{[(2R)-2-hydroxy-3,3-dimethylbutyl]oxy}-3-methylphenyl)pentan-3-yl]-2-methylphenoxy}acetic acid
Authors:Itoh, S, Iijima, S.
Deposit date:2011-05-20
Release date:2011-11-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Novel nonsecosteroidal vitamin D(3) carboxylic acid analogs for osteoporosis, and SAR analysis.
Bioorg.Med.Chem., 19, 2011
3AZ2
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BU of 3az2 by Molmil
Crystal Structure Analysis of Vitamin D receptor
Descriptor: 5-{4-[3-(4-{[(2R)-2-hydroxy-3,3-dimethylbutyl]oxy}-3-methylphenyl)pentan-3-yl]-2-methylphenoxy}pentanoic acid, Vitamin D3 receptor
Authors:Itoh, S, Iijima, S.
Deposit date:2011-05-20
Release date:2011-11-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Novel nonsecosteroidal vitamin D(3) carboxylic acid analogs for osteoporosis, and SAR analysis.
Bioorg.Med.Chem., 19, 2011
3AZ3
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BU of 3az3 by Molmil
Crystal Structure Analysis of Vitamin D receptor
Descriptor: (4S)-4-hydroxy-5-[4-(3-{4-[(3S)-3-hydroxy-4,4-dimethylpentyl]-3-methylphenyl}pentan-3-yl)-2-methylphenoxy]pentanoic acid, Vitamin D3 receptor
Authors:Itoh, S, Iijima, S.
Deposit date:2011-05-20
Release date:2011-11-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Novel nonsecosteroidal vitamin D(3) carboxylic acid analogs for osteoporosis, and SAR analysis.
Bioorg.Med.Chem., 19, 2011
2DDQ
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BU of 2ddq by Molmil
Crystal Structure of the Fab fragment of a R310 antibody complexed with (R)-HNE-histidine adduct
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, N-ACETYL-1-[(2R,3S,5R)-5-HYDROXY-2-PENTYLTETRAHYDROFURAN-3-YL]-L-HISTIDINE, R310 antibody heavy chain, ...
Authors:Ito, S.
Deposit date:2006-02-02
Release date:2006-07-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Bispecific abs against modified protein and DNA with oxidized lipids
Proc.Natl.Acad.Sci.Usa, 103, 2006
3A73
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BU of 3a73 by Molmil
Crystal Structure Analysis of Human serum albumin complexed with delta 12-prostaglandin J2
Descriptor: (5Z,12Z,15S)-15-hydroxy-11-oxoprosta-5,9,12-trien-1-oic acid, MYRISTIC ACID, Serum albumin
Authors:Ito, S.
Deposit date:2009-09-11
Release date:2010-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Delta12-prostaglandin J2 as a product and ligand of human serum albumin: formation of an unusual covalent adduct at His146.
J.Am.Chem.Soc., 132, 2010
6L67
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BU of 6l67 by Molmil
X-ray structure of human galectin-10 in complex with D-galactose
Descriptor: Galectin-10, beta-D-galactopyranose
Authors:Kamitori, S.
Deposit date:2019-10-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L6B
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BU of 6l6b by Molmil
X-ray structure of human galectin-10 in complex with L-fucose
Descriptor: Galectin-10, beta-L-fucopyranose
Authors:Kamitori, S.
Deposit date:2019-10-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L6C
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BU of 6l6c by Molmil
X-ray structure of human galectin-10 in complex with D-arabinose
Descriptor: Galectin-10, alpha-D-arabinopyranose
Authors:Kamitori, S.
Deposit date:2019-10-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L64
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BU of 6l64 by Molmil
X-ray structure of human galectin-10 in complex with D-glucose
Descriptor: Galectin-10, beta-D-glucopyranose
Authors:Kamitori, S.
Deposit date:2019-10-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L6A
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BU of 6l6a by Molmil
X-ray structure of human galectin-10 in complex with D-mannose
Descriptor: Galectin-10, beta-D-mannopyranose
Authors:Kamitori, S.
Deposit date:2019-10-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
3A5J
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BU of 3a5j by Molmil
Crystal structure of protein-tyrosine phosphatase 1B
Descriptor: MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1
Authors:Ito, S.
Deposit date:2009-08-08
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Post-translational modification of a non-catalytic Cys121 of PTP1B
To be Published
3A5K
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BU of 3a5k by Molmil
Crystal structure of protein-tyrosine phosphatase 1B
Descriptor: MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1
Authors:Ito, S.
Deposit date:2009-08-08
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Post-translational modification of a non-catalytic Cys121 of PTP1B
To be Published
8YXK
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BU of 8yxk by Molmil
X-ray structure of Clostridioides difficile endolysin Ecd09610 glucosaminidase domain.
Descriptor: Phage cell wall hydrolase
Authors:Kamitori, S, Tamai, E.
Deposit date:2024-04-02
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:X-ray structure and mutagenesis analyses of Clostridioides difficile endolysin Ecd09610 glucosaminidase domain.
Biochem.Biophys.Res.Commun., 715, 2024
8YXN
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BU of 8yxn by Molmil
X-ray structure of Clostridium perfringens autolysin catalytic domain in the P1 form
Descriptor: Cell surface protein
Authors:Kamitori, S, Tamai, E.
Deposit date:2024-04-02
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray structure and mutagenesis analyses of Clostridioides difficile endolysin Ecd09610 glucosaminidase domain.
Biochem.Biophys.Res.Commun., 715, 2024

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