Search by PDB author

Accurate computational design of genetically encoded 3D protein crystals
Descriptor:	I432-1-CC
Authors:	Bera, A.K, Li, Z, Baker, D.
Deposit date:	2022-11-28
Release date:	2023-11-01
Last modified:	2023-12-20
Method:	X-RAY DIFFRACTION (3.66 Å)
Cite:	Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023

8GEL

Cryo-EM structure of synthetic tetrameric building block sC4
Descriptor:	sC4
Authors:	Redler, R.L, Huddy, T.F, Hsia, Y, Baker, D, Ekiert, D, Bhabha, G.
Deposit date:	2023-03-07
Release date:	2024-03-13
Last modified:	2024-04-10
Method:	ELECTRON MICROSCOPY (3.9 Å)
Cite:	Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024

8G9J

Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor:	THR1
Authors:	Huddy, T, Bera, A.K, Baker, D.
Deposit date:	2023-02-21
Release date:	2024-03-13
Last modified:	2024-04-10
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024

8G9K

Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor:	THR2
Authors:	Bera, A.K, Huddy, T, Baker, D, Kang, A.
Deposit date:	2023-02-21
Release date:	2024-03-13
Last modified:	2024-04-10
Method:	X-RAY DIFFRACTION (2.48 Å)
Cite:	Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024

8GA6

Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor:	THR6
Authors:	Huddy, T, Bera, A.K, Baker, D, Kang, A.
Deposit date:	2023-02-22
Release date:	2024-03-13
Last modified:	2024-04-10
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024

8GA7

Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor:	THR5
Authors:	Huddy, T, Bera, A.K, Baker, D, Kang, A.
Deposit date:	2023-02-22
Release date:	2024-03-13
Last modified:	2024-04-10
Method:	X-RAY DIFFRACTION (2.93 Å)
Cite:	Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024

6VLW

Crystal Structure of 426cOD in Complex with VRC01 Fab
Descriptor:	1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 426cOD, ...
Authors:	Weidle, C, Pancera, M.
Deposit date:	2020-01-27
Release date:	2020-12-09
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (3.42 Å)
Cite:	HIV-1 VRC01 Germline-Targeting Immunogens Select Distinct Epitope-Specific B Cell Receptors. Immunity, 53, 2020

2N0K

Chemical shift assignments and structure of the alpha-crystallin domain from human, HSPB5
Descriptor:	Alpha-crystallin B chain
Authors:	Rajagopal, P, Klevit, R.E, Shi, L, Baker, D.
Deposit date:	2015-03-09
Release date:	2015-06-03
Last modified:	2024-05-15
Method:	SOLUTION NMR
Cite:	A conserved histidine modulates HSPB5 structure to trigger chaperone activity in response to stress-related acidosis. Elife, 4, 2015

7U2T

Influenza Neuraminidase N1-MI15-sNAp-174
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Influenza N1-MI15-sNAp-174
Authors:	Acton, O.J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:	2022-02-24
Release date:	2022-04-20
Method:	ELECTRON MICROSCOPY (3.25 Å)
Cite:	Structure-based design of stabilized recombinant influenza neuraminidase tetramers. Nat Commun, 13, 2022

7U2Q

Influenza Neuraminidase N1-CA09-sNAp-155
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Influenza N1-CA09-sNAp-155
Authors:	Acton, O.J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:	2022-02-24
Release date:	2022-04-20
Method:	ELECTRON MICROSCOPY (3.2 Å)
Cite:	Structure-based design of stabilized recombinant influenza neuraminidase tetramers. Nat Commun, 13, 2022

8CUS

Accurate computational design of genetically encoded 3D protein crystals
Descriptor:	I432-1(NaCl) Chain A, I432-1(NaCl) Chain B
Authors:	Bera, A.K, Li, Z, Baker, D.
Deposit date:	2022-05-17
Release date:	2023-11-01
Last modified:	2023-12-20
Method:	X-RAY DIFFRACTION (3.98 Å)
Cite:	Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023

8CUT

Accurate computational design of genetically encoded 3D protein crystals
Descriptor:	I432-1(Imd) Chain A, I432-1(Imd) Chain B
Authors:	Bera, A.K, Li, Z, Baker, D.
Deposit date:	2022-05-17
Release date:	2023-11-01
Last modified:	2023-12-20
Method:	X-RAY DIFFRACTION (4 Å)
Cite:	Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023

8CUW

Accurate computational design of genetically encoded 3D protein crystals
Descriptor:	F4132-1-3 Chain A, F4132-1-3 Chain B
Authors:	Bera, A.K, Li, Z, Baker, D.
Deposit date:	2022-05-17
Release date:	2023-11-01
Last modified:	2023-12-20
Method:	X-RAY DIFFRACTION (3.55 Å)
Cite:	Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023

8CUX

Accurate computational design of genetically encoded 3D protein crystals
Descriptor:	R3-1 Chain B
Authors:	Bera, A.K, Natterman, U, Baker, D.
Deposit date:	2022-05-17
Release date:	2023-11-01
Last modified:	2023-12-20
Method:	X-RAY DIFFRACTION (1.85 Å)
Cite:	Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023

8CWZ

Accurate computational design of genetically encoded 3D protein crystals
Descriptor:	I432-1-X3 Chain A, I432-1-X3 Chain B
Authors:	Bera, A.K, Li, Z, Baker, D.
Deposit date:	2022-05-19
Release date:	2023-11-01
Last modified:	2023-12-20
Method:	X-RAY DIFFRACTION (5.53 Å)
Cite:	Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023

8CWS

Accurate computational design of genetically encoded 3D protein crystals
Descriptor:	F4132-2 Chain A, F4132-2 Chain B
Authors:	Bera, A.K, Li, Z, Baker, D.
Deposit date:	2022-05-19
Release date:	2023-11-01
Last modified:	2023-12-20
Method:	X-RAY DIFFRACTION (4.4 Å)
Cite:	Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023

8CUU

Accurate computational design of genetically encoded 3D protein crystals
Descriptor:	F4132-1-0 chain A, F4132-1-0 chain B
Authors:	Bera, A.K, Li, Z, Baker, D.
Deposit date:	2022-05-17
Release date:	2023-11-01
Last modified:	2023-12-20
Method:	X-RAY DIFFRACTION (2.91 Å)
Cite:	Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023

8CUV

Accurate computational design of genetically encoded 3D protein crystals
Descriptor:	F4132-1 chain A, F4132-1 chain B
Authors:	Bera, A.K, Li, Z, Baker, D.
Deposit date:	2022-05-17
Release date:	2023-11-01
Last modified:	2023-12-20
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023

8E1E

Scaffolding protein functional sites using deep learning
Descriptor:	SG122_C3
Authors:	Bera, A.K, Gerben, S, Baker, D.
Deposit date:	2022-08-10
Release date:	2023-08-16
Method:	X-RAY DIFFRACTION (4.27 Å)
Cite:	Design of Diverse Asymmetric Pockets in De Novo Homo-oligomeric Proteins. Biochemistry, 62, 2023

8ERW

Precisely patterned nanofibers made from extendable protein multiplexes
Descriptor:	C2HR4_8r
Authors:	Bick, M.J, Parmeggiani, F, Bethel, N.P, Sankaran, B, Baker, D.
Deposit date:	2022-10-12
Release date:	2023-08-23
Last modified:	2023-12-20
Method:	X-RAY DIFFRACTION (2.88 Å)
Cite:	Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023

8EOZ

Precisely patterned nanofibers made from extendable protein multiplexes
Descriptor:	C3HR3_4r
Authors:	Bera, A.K, Bethel, N.P, Kang, A.
Deposit date:	2022-10-04
Release date:	2023-08-16
Last modified:	2023-12-20
Method:	X-RAY DIFFRACTION (3 Å)
Cite:	Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023

8EOV

Precisely patterned nanofibers made from extendable protein multiplexes
Descriptor:	C2HR1_4r, PHOSPHATE ION
Authors:	Bera, A.K, Bethel, N.P.
Deposit date:	2022-10-04
Release date:	2023-08-16
Last modified:	2023-12-20
Method:	X-RAY DIFFRACTION (1.59 Å)
Cite:	Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023

8EOX

Precisely patterned nanofibers made from extendable protein multiplexes
Descriptor:	C4HR1_4r
Authors:	Bera, A.K, Bethel, N.P.
Deposit date:	2022-10-04
Release date:	2023-08-16
Last modified:	2023-12-20
Method:	X-RAY DIFFRACTION (3.3 Å)
Cite:	Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023

8FBO

Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Descriptor:	KWOCA_102
Authors:	Wang, J.Y, Khmelinskaia, A, Bera, A.K, King, N.P.
Deposit date:	2022-11-29
Release date:	2023-03-22
Last modified:	2024-05-22
Method:	X-RAY DIFFRACTION (3.4 Å)
Cite:	Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains. Proc.Natl.Acad.Sci.USA, 120, 2023

8FBJ

Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Descriptor:	KWOCA_60
Authors:	Wang, J.Y, Khmelinskaia, A, Bera, A.K, King, N.P.
Deposit date:	2022-11-29
Release date:	2023-03-22
Last modified:	2024-05-22
Method:	X-RAY DIFFRACTION (3.25 Å)
Cite:	Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains. Proc.Natl.Acad.Sci.USA, 120, 2023

<123 >

Total results:	53
Displayed results:	25
Sorted by:	Hit score (from highest)