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5WQI
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BU of 5wqi by Molmil
Structure of fungal meroterpenoid isomerase Trt14 complexed with hydrolyzed product
Descriptor: (1R,2S,4aS,4bS,8aS,10S,10aS)-2-[(2S)-3-methoxy-2-methyl-2-oxidanyl-3-oxidanylidene-propanoyl]-2,3,4b,8,8,10a-hexamethyl-10-oxidanyl-7,9-bis(oxidanylidene)-1,4a,5,6,8a,10-hexahydrophenanthrene-1-carboxylic acid, CALCIUM ION, Isomerase trt14
Authors:Mori, T, Matsuda, Y, Abe, I.
Deposit date:2016-11-27
Release date:2017-07-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Molecular basis for the unusual ring reconstruction in fungal meroterpenoid biogenesis
Nat. Chem. Biol., 13, 2017
3X2O
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BU of 3x2o by Molmil
Neutron and X-ray joint refined structure of PcCel45A apo form at 298K.
Descriptor: Endoglucanase V-like protein
Authors:Nakamura, A, Ishida, T, Kusaka, K, Yamada, T, Tanaka, I, Niimura, N, Samejima, M, Igarashi, K.
Deposit date:2014-12-22
Release date:2015-10-07
Last modified:2019-12-18
Method:NEUTRON DIFFRACTION (1.5 Å), X-RAY DIFFRACTION
Cite:"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
3X2M
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BU of 3x2m by Molmil
X-ray structure of PcCel45A with cellopentaose at 0.64 angstrom resolution.
Descriptor: Endoglucanase V-like protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Nakamura, A, Ishida, T, Samejima, M, Igarashi, K.
Deposit date:2014-12-22
Release date:2015-10-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (0.64 Å)
Cite:"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
3X2P
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BU of 3x2p by Molmil
Neutron and X-ray joint refined structure of PcCel45A with cellopentaose at 298K.
Descriptor: Endoglucanase V-like protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Nakamura, A, Ishida, T, Kusaka, K, Yamada, T, Tanaka, I, Niimura, N, Samejima, M, Igarashi, K.
Deposit date:2014-12-22
Release date:2015-10-14
Last modified:2020-07-29
Method:NEUTRON DIFFRACTION (1.518 Å), X-RAY DIFFRACTION
Cite:"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
3X2K
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BU of 3x2k by Molmil
X-ray structure of PcCel45A D114N with cellopentaose at 95K.
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-methylpentane-1,5-diol, Endoglucanase V-like protein, ...
Authors:Nakamura, A, Ishida, T, Samejima, M, Igarashi, K.
Deposit date:2014-12-22
Release date:2015-10-07
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.182 Å)
Cite:"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
2ZHO
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BU of 2zho by Molmil
Crystal structure of the regulatory subunit of aspartate kinase from Thermus thermophilus (ligand free form)
Descriptor: Aspartokinase
Authors:Yoshida, A, Tomita, T, Kuzuyama, T, Nishiyama, M.
Deposit date:2008-02-06
Release date:2009-02-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Crystal structures of the regulatory subunit of Thr-sensitive aspartate kinase from Thermus thermophilus
Febs J., 276, 2009
4QLX
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BU of 4qlx by Molmil
Crystal structure of CLA-ER with product binding
Descriptor: 10-oxooctadecanoic acid, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Hou, F, Miyakawa, T, Tanokura, M.
Deposit date:2014-06-13
Release date:2015-02-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and reaction mechanism of a novel enone reductase.
Febs J., 282, 2015
4QLY
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BU of 4qly by Molmil
Crystal structure of CLA-ER, a novel enone reductase catalyzing a key step of a gut-bacterial fatty acid saturation metabolism, biohydrogenation
Descriptor: Enone reductase CLA-ER, FLAVIN MONONUCLEOTIDE
Authors:Hou, F, Miyakawa, T, Tanokura, M.
Deposit date:2014-06-13
Release date:2015-02-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Structure and reaction mechanism of a novel enone reductase.
Febs J., 282, 2015
5X9J
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BU of 5x9j by Molmil
Structure of PrhC from Penicillium brasilianum NBRC 6234
Descriptor: PrhC
Authors:Mori, T, Wang, H, Matsuda, Y, Abe, I.
Deposit date:2017-03-08
Release date:2017-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular basis for the unusual ring reconstruction in fungal meroterpenoid biogenesis
Nat. Chem. Biol., 13, 2017
5YBQ
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BU of 5ybq by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S in complex with preaustinoid A2
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, PrhA, ...
Authors:Nakashima, Y, Senda, M.
Deposit date:2017-09-05
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5YBM
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BU of 5ybm by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA
Descriptor: PrhA
Authors:Nakashima, Y, Senda, M.
Deposit date:2017-09-05
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.115 Å)
Cite:Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5YBR
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BU of 5ybr by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S in complex with preaustinoid A3
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, PrhA, ...
Authors:Nakashima, Y, Senda, M.
Deposit date:2017-09-05
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.261 Å)
Cite:Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
4YZJ
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BU of 4yzj by Molmil
Crystal structure of selnomethionin-labeled indole prenyltransferase TleC
Descriptor: Tryptophan dimethylallyltransferase
Authors:Mori, T, Matsui, T, Morita, H, Abe, I.
Deposit date:2015-03-25
Release date:2016-03-16
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (2.106 Å)
Cite:Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
5YBO
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BU of 5ybo by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA in complex with preaustinoid A1
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, PrhA, ...
Authors:Nakashima, Y, Senda, M.
Deposit date:2017-09-05
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.204 Å)
Cite:Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5YBL
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BU of 5ybl by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AusE
Descriptor: 2-OXOGLUTARIC ACID, MANGANESE (II) ION, Multifunctional dioxygenase ausE
Authors:Nakashima, Y, Senda, M.
Deposit date:2017-09-05
Release date:2018-01-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.108 Å)
Cite:Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5YBT
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BU of 5ybt by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S/M241V in complex with berkeleyone A
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, PrhA, ...
Authors:Nakashima, Y, Senda, M.
Deposit date:2017-09-05
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5YBS
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BU of 5ybs by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S in complex with berkeleyone A
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, PrhA, ...
Authors:Nakashima, Y, Senda, M.
Deposit date:2017-09-05
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5YBN
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BU of 5ybn by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA in complex with (alpha)ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, PrhA
Authors:Nakashima, Y, Senda, M.
Deposit date:2017-09-05
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5YBP
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BU of 5ybp by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S in complex with preaustinoid A1
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, PrhA, ...
Authors:Nakashima, Y, Senda, M.
Deposit date:2017-09-05
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.312 Å)
Cite:Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
4YL7
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BU of 4yl7 by Molmil
Crystal structure of the indole prenyltransferase MpnD from Marinactinospora thermotolerans
Descriptor: Aromatic prenyltransferase
Authors:Mori, T, Morita, H, Abe, I.
Deposit date:2015-03-05
Release date:2016-03-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
4YZK
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BU of 4yzk by Molmil
Crystal structure of the indole prenyltransferase TleC apo structure
Descriptor: Tryptophan dimethylallyltransferase
Authors:Mori, T, Morita, H, Abe, I.
Deposit date:2015-03-25
Release date:2016-03-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
4YZL
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BU of 4yzl by Molmil
Crystal structure of the indole prenyltransferase TleC complexed with indolactam V and DMSPP
Descriptor: (2S,5S)-5-(hydroxymethyl)-1-methyl-2-(propan-2-yl)-1,2,4,5,6,8-hexahydro-3H-[1,4]diazonino[7,6,5-cd]indol-3-one, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Tryptophan dimethylallyltransferase
Authors:Mori, T, Morita, H, Abe, I.
Deposit date:2015-03-25
Release date:2016-03-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.096 Å)
Cite:Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
4YLA
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BU of 4yla by Molmil
Crystal structure of the indole prenyltransferase MpnD complexed with indolactam V and DMSPP
Descriptor: (2S,5S)-5-(hydroxymethyl)-1-methyl-2-(propan-2-yl)-1,2,4,5,6,8-hexahydro-3H-[1,4]diazonino[7,6,5-cd]indol-3-one, Aromatic prenyltransferase, DIMETHYLALLYL S-THIOLODIPHOSPHATE, ...
Authors:Mori, T, Morita, H, Abe, I.
Deposit date:2015-03-05
Release date:2016-03-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
4IJ4
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BU of 4ij4 by Molmil
Crystal Structure of a Family GH19 chitinase from Bryum coronatum in complex with (GlcNAc)4
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase A
Authors:Numata, T, Umemoto, N, Ohnuma, T, Fukamizo, T.
Deposit date:2012-12-21
Release date:2014-03-26
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of a "loopless" GH19 chitinase in complex with chitin tetrasaccharide spanning the catalytic center.
Biochim.Biophys.Acta, 1844, 2014
6J82
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BU of 6j82 by Molmil
Crystal structure of TleB apo
Descriptor: Cytochrome P-450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Alblova, M, Nakamura, H, Mori, T, Abe, I.
Deposit date:2019-01-18
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Molecular basis for the P450-catalyzed C-N bond formation in indolactam biosynthesis.
Nat.Chem.Biol., 15, 2019

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