Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7NYN
DownloadVisualize
BU of 7nyn by Molmil
Mutant Y526A of SH3 domain of JNK-interacting Protein 1 (JIP1)
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, ...
Authors:Perez, L.M, Ielasi, F.S, Palencia, A, Jensen, M.R.
Deposit date:2021-03-23
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.537 Å)
Cite:Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
7NYL
DownloadVisualize
BU of 7nyl by Molmil
Mutant H493A of SH3 domain of JNK-interacting Protein 1 (JIP1)
Descriptor: SH3 domain of JNK-interacting Protein 1 (JIP1), TETRAETHYLENE GLYCOL, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Perez, L.M, Ielasi, F.S, Palencia, A, Jensen, M.R.
Deposit date:2021-03-23
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
7NZD
DownloadVisualize
BU of 7nzd by Molmil
Fourth SH3 domain of POSH (Plenty of SH3 Domains protein)
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, E3 ubiquitin-protein ligase SH3RF1
Authors:Palencia, A, Bessa, L.M, Jensen, M.R.
Deposit date:2021-03-23
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
6SUN
DownloadVisualize
BU of 6sun by Molmil
Amicoumacin kinase hAmiN in complex with AMP-PNP, Ca2+ and Ami
Descriptor: APH domain-containing protein, amicoumacin kinase, Amicoumacin A, ...
Authors:Bourenkov, G.P, Mokrushina, Y.A, Terekhov, S.S, Smirnov, I.V, Gabibov, A.G, Altman, S.
Deposit date:2019-09-16
Release date:2020-07-22
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A kinase bioscavenger provides antibiotic resistance by extremely tight substrate binding.
Sci Adv, 6, 2020
6SV5
DownloadVisualize
BU of 6sv5 by Molmil
Amicoumacin kinase AmiN in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Phosphotransferase enzyme family protein, amicoumacin kinase
Authors:Bourenkov, G.P, Mokrushina, Y.A, Terekhov, S.S, Smirnov, I.V, Gabibov, A.G, Altman, S.
Deposit date:2019-09-17
Release date:2020-07-22
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:A kinase bioscavenger provides antibiotic resistance by extremely tight substrate binding.
Sci Adv, 6, 2020
8QOB
DownloadVisualize
BU of 8qob by Molmil
Crystal structure of phosphoserine phosphatase (SerB) from Brucella melitensis in complex with AP3 and magnesium
Descriptor: (2~{R})-2-azanyl-3-phosphono-propanoic acid, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Scaillet, T, Wouters, J.
Deposit date:2023-09-28
Release date:2024-10-09
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Crystal structure of phosphoserine phosphatase (SerB) from Brucella melitensis in complex with AP3 and magnesium
To Be Published
6SUM
DownloadVisualize
BU of 6sum by Molmil
Amicoumacin kinase hAmiN in complex with AMP-PNP, MG2+ and Ami
Descriptor: ACETATE ION, AMICOUMACIN KINASE, Amicoumacin A, ...
Authors:Bourenkov, G.P, Mokrushina, Y.A, Terekhov, S.S, Smirnov, I.V, Gabibov, A.G, Altman, S.
Deposit date:2019-09-16
Release date:2020-07-22
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A kinase bioscavenger provides antibiotic resistance by extremely tight substrate binding.
Sci Adv, 6, 2020
6SUL
DownloadVisualize
BU of 6sul by Molmil
Amicoumacin kinase AmiN in complex with AMP-PNP, Mg2+ and Ami
Descriptor: Amicoumacin A, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Bourenkov, G.P, Mokrushina, Y.A, Terekhov, S.S, Smirnov, I.V, Gabibov, A.G, Altman, S.
Deposit date:2019-09-15
Release date:2020-07-22
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A kinase bioscavenger provides antibiotic resistance by extremely tight substrate binding.
Sci Adv, 6, 2020
6AXJ
DownloadVisualize
BU of 6axj by Molmil
Crystal structure of the Yaf9 YEATS domain bound to H3K27ac
Descriptor: ALY-SER-ALA-PRO-ALA, GLYCEROL, Protein AF-9 homolog, ...
Authors:Klein, B.J, Kutateladze, T.G.
Deposit date:2017-09-06
Release date:2017-11-22
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.379 Å)
Cite:Yaf9 subunit of the NuA4 and SWR1 complexes targets histone H3K27ac through its YEATS domain.
Nucleic Acids Res., 46, 2018
6SUI
DownloadVisualize
BU of 6sui by Molmil
AMICOUMACIN KINASE AMIN
Descriptor: PENTAETHYLENE GLYCOL, Phosphotransferase enzyme family protein
Authors:Bourenkov, G.P, Mokrushina, Y.A, Terekhov, S.S, Smirnov, I.V, Gabibov, A.G, Altman, S.
Deposit date:2019-09-14
Release date:2020-07-22
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A kinase bioscavenger provides antibiotic resistance by extremely tight substrate binding.
Sci Adv, 6, 2020
7OQM
DownloadVisualize
BU of 7oqm by Molmil
Human OMPD-domain of UMPS in complex with substrate OMP at 1.05 Angstroms resolution, 20 minutes soaking
Descriptor: GLYCEROL, OROTIDINE-5'-MONOPHOSPHATE, SULFATE ION, ...
Authors:Rindfleisch, S, Rabe von Pappenheim, F, Tittmann, K.
Deposit date:2021-06-03
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
7OQN
DownloadVisualize
BU of 7oqn by Molmil
Human OMPD-domain of UMPS in complex with substrate OMP at 1.10 Angstroms resolution, 30 minutes soaking
Descriptor: GLYCEROL, SULFATE ION, URIDINE-5'-MONOPHOSPHATE, ...
Authors:Rindfleisch, S, Rabe von Pappenheim, F, Tittmann, K.
Deposit date:2021-06-03
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
7OQF
DownloadVisualize
BU of 7oqf by Molmil
Human OMPD-domain of UMPS in complex with OMP at 1.05 Angstrom resolution, 5 minutes soaking
Descriptor: GLYCEROL, OROTIDINE-5'-MONOPHOSPHATE, SULFATE ION, ...
Authors:Rindfleisch, S, Rabe von Pappenheim, F, Tittmann, K.
Deposit date:2021-06-03
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
7OQK
DownloadVisualize
BU of 7oqk by Molmil
Human OMPD-domain of UMPS in complex with substrate OMP at 1.10 Angstroms resolution, 15 minutes soaking
Descriptor: GLYCEROL, OROTIDINE-5'-MONOPHOSPHATE, SULFATE ION, ...
Authors:Rindfleisch, S, Rabe von Pappenheim, F, Tittmann, K.
Deposit date:2021-06-03
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
7OQI
DownloadVisualize
BU of 7oqi by Molmil
Human OMPD-domain of UMPS in complex with substrate OMP at 1.15 Angstrom resolution, 10 minutes soaking
Descriptor: GLYCEROL, OROTIDINE-5'-MONOPHOSPHATE, SULFATE ION, ...
Authors:Rindfleisch, S, Rabe von Pappenheim, F, Tittmann, K.
Deposit date:2021-06-03
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
7OUZ
DownloadVisualize
BU of 7ouz by Molmil
Human OMPD-domain of UMPS in complex with 6-hydroxy-UMP at 0.9 Angstroms resolution, crystal 1
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, PROLINE, ...
Authors:Rindfleisch, S, Tittmann, K.
Deposit date:2021-06-14
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
7OV0
DownloadVisualize
BU of 7ov0 by Molmil
Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in resting state at 0.95 Angstrom resolution
Descriptor: GLYCEROL, PROLINE, SULFATE ION, ...
Authors:Rindfleisch, S, Rabe von Pappenheim, F.
Deposit date:2021-06-14
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
7OTU
DownloadVisualize
BU of 7otu by Molmil
Human OMPD-domain of UMPS in complex with 6-hydroxy-UMP at 0.95 Angstroms resolution, crystal 2
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Isoform 2 of Uridine 5'-monophosphate synthase
Authors:Rindfleisch, S, Rabe von Pappenheim, F, Tittmann, K.
Deposit date:2021-06-10
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
7A43
DownloadVisualize
BU of 7a43 by Molmil
Fluoroacetate Dehalogenase measured by serial femtosecond crystallography
Descriptor: CHLORIDE ION, Fluoroacetate dehalogenase
Authors:Mehrabi, P, Schulz, E.C, Buecker, R.
Deposit date:2020-08-19
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Serial femtosecond and serial synchrotron crystallography can yield data of equivalent quality: A systematic comparison.
Sci Adv, 7, 2021
7A45
DownloadVisualize
BU of 7a45 by Molmil
CO-bound sperm whale myoglobin measured by serial femtosecond crystallography
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Mehrabi, P, Schulz, E.C, Buecker, R.
Deposit date:2020-08-19
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Serial femtosecond and serial synchrotron crystallography can yield data of equivalent quality: A systematic comparison.
Sci Adv, 7, 2021
7A42
DownloadVisualize
BU of 7a42 by Molmil
Fluoroacetate Dehalogenase measured by serial synchrotron crystallography
Descriptor: CHLORIDE ION, Fluoroacetate dehalogenase
Authors:Mehrabi, P, Schulz, E.C, Buecker, R.
Deposit date:2020-08-19
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Serial femtosecond and serial synchrotron crystallography can yield data of equivalent quality: A systematic comparison.
Sci Adv, 7, 2021
7A44
DownloadVisualize
BU of 7a44 by Molmil
CO-bound sperm whale myoglobin measured by serial synchrotron crystallography
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Mehrabi, P, Schulz, E.C, Buecker, R.
Deposit date:2020-08-19
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Serial femtosecond and serial synchrotron crystallography can yield data of equivalent quality: A systematic comparison.
Sci Adv, 7, 2021
6ZWZ
DownloadVisualize
BU of 6zwz by Molmil
Resting state structure of the OMPD-domain of human UMPS variant (K314AcK) at 1.2 Angstroms resolution
Descriptor: SULFATE ION, Uridine 5'-monophosphate synthase
Authors:Tittmann, K, Rindfleisch, S, Krull, M.
Deposit date:2020-07-29
Release date:2022-02-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
6ZX1
DownloadVisualize
BU of 6zx1 by Molmil
OMPD-domain of human UMPS in complex with 6-Aza-UMP at 1.0 Angstroms resolution
Descriptor: 6-AZA URIDINE 5'-MONOPHOSPHATE, PROLINE, SULFATE ION, ...
Authors:Tittmann, K, Rindfleisch, S, Krull, M.
Deposit date:2020-07-29
Release date:2022-02-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
6ZX0
DownloadVisualize
BU of 6zx0 by Molmil
OMPD-domain of human UMPS in complex with the substrate OMP at 1.25 Angstroms resolution
Descriptor: GLYCEROL, OROTIDINE-5'-MONOPHOSPHATE, SULFATE ION, ...
Authors:Tittmann, K, Rindfleisch, S, Krull, M.
Deposit date:2020-07-29
Release date:2022-02-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon