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5YBS
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BU of 5ybs by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S in complex with berkeleyone A
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, PrhA, ...
Authors:Nakashima, Y, Senda, M.
Deposit date:2017-09-05
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5YBN
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BU of 5ybn by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA in complex with (alpha)ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, PrhA
Authors:Nakashima, Y, Senda, M.
Deposit date:2017-09-05
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5YBP
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BU of 5ybp by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S in complex with preaustinoid A1
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, PrhA, ...
Authors:Nakashima, Y, Senda, M.
Deposit date:2017-09-05
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.312 Å)
Cite:Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5XSW
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BU of 5xsw by Molmil
Crystal structure of an archaeal chitinase in the substrate-complex form (P63)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, Chitinase, GLYCEROL, ...
Authors:Nishitani, Y, Miki, K.
Deposit date:2017-06-15
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of an archaeal chitinase ChiD and its ligand complexes.
Glycobiology, 28, 2018
5XSV
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BU of 5xsv by Molmil
Crystal structure of an archaeal chitinase in the ligand-free form
Descriptor: COBALT (II) ION, Chitinase, SULFATE ION
Authors:Nishitani, Y, Miki, K.
Deposit date:2017-06-15
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.723 Å)
Cite:Crystal structures of an archaeal chitinase ChiD and its ligand complexes.
Glycobiology, 28, 2018
5XSX
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BU of 5xsx by Molmil
Crystal structure of an archaeal chitinase in the substrate-complex form (P212121)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase, GLYCEROL, ...
Authors:Nishitani, Y, Miki, K.
Deposit date:2017-06-15
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.642 Å)
Cite:Crystal structures of an archaeal chitinase ChiD and its ligand complexes.
Glycobiology, 28, 2018
3VGO
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BU of 3vgo by Molmil
Crystal structure of the N-terminal fragment of Cbl-b
Descriptor: E3 ubiquitin-protein ligase CBL-B
Authors:Kobashigawa, Y, Noda, N.N, Inagaki, F.
Deposit date:2011-08-18
Release date:2011-12-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Autoinhibition and phosphorylation-induced activation mechanisms of human cancer and autoimmune disease-related E3 protein Cbl-b
Proc.Natl.Acad.Sci.USA, 108, 2011
2Z7E
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BU of 2z7e by Molmil
Crystal structure of Aquifex aeolicus IscU with bound [2Fe-2S] cluster
Descriptor: FE2/S2 (INORGANIC) CLUSTER, NifU-like protein, SULFATE ION
Authors:Shimomura, Y, Wada, K, Takahashi, Y, Fukuyama, K.
Deposit date:2007-08-20
Release date:2008-08-19
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The asymmetric trimeric architecture of [2Fe-2S] IscU: implications for its scaffolding during iron-sulfur cluster biosynthesis
J.Mol.Biol., 383, 2008
2Z9W
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BU of 2z9w by Molmil
Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxal
Descriptor: 3-HYDROXY-5-(HYDROXYMETHYL)-2-METHYLISONICOTINALDEHYDE, Aspartate aminotransferase, GLYCEROL, ...
Authors:Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
Deposit date:2007-09-26
Release date:2007-11-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
2Z9X
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BU of 2z9x by Molmil
Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxyl-L-alanine
Descriptor: 3-HYDROXY-5-(HYDROXYMETHYL)-2-METHYLISONICOTINALDEHYDE, ALANINE, Aspartate aminotransferase, ...
Authors:Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
Deposit date:2007-09-26
Release date:2007-11-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
2Z9V
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BU of 2z9v by Molmil
Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxamine
Descriptor: 4-(AMINOMETHYL)-5-(HYDROXYMETHYL)-2-METHYLPYRIDIN-3-OL, Aspartate aminotransferase, GLYCEROL, ...
Authors:Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
Deposit date:2007-09-26
Release date:2007-11-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
2Z9U
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BU of 2z9u by Molmil
Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti at 2.0 A resolution
Descriptor: Aspartate aminotransferase, GLYCEROL, SULFATE ION
Authors:Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
Deposit date:2007-09-26
Release date:2007-11-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
3A12
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BU of 3a12 by Molmil
Crystal structure of Type III Rubisco complexed with 2-CABP
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
Authors:Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K.
Deposit date:2009-03-25
Release date:2010-04-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile
J.Biol.Chem., 285, 2010
3A13
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BU of 3a13 by Molmil
Crystal structure of Type III Rubisco SP4 mutant complexed with 2-CABP and activated with Ca
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, CALCIUM ION, MAGNESIUM ION, ...
Authors:Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K.
Deposit date:2009-03-25
Release date:2010-04-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structure-based optimization of a Type III Rubisco from a hyperthermophile
To be Published
2ZJ3
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BU of 2zj3 by Molmil
Isomerase domain of human glucose:fructose-6-phosphate amidotransferase
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1
Authors:Nakaishi, Y, Bando, M, Kondo, K, Tsuge, H.
Deposit date:2008-02-29
Release date:2009-01-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of human glutamine:fructose-6-phosphate amidotransferase, a key regulator in type 2 diabetes
Febs Lett., 583, 2009
2ZJ4
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BU of 2zj4 by Molmil
Isomerase domain of human glucose:fructose-6-phosphate amidotransferase
Descriptor: 2-DEOXY-2-AMINO GLUCITOL-6-PHOSPHATE, Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1
Authors:Nakaishi, Y, Bando, M, Kondo, K, Tsuge, H.
Deposit date:2008-02-29
Release date:2009-01-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of human glutamine:fructose-6-phosphate amidotransferase, a key regulator in type 2 diabetes
Febs Lett., 583, 2009
2ZIB
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BU of 2zib by Molmil
Crystal structure analysis of calcium-independent type II antifreeze protein
Descriptor: SULFATE ION, Type II antifreeze protein
Authors:Nishimiya, Y, Sato, R, Kondo, H, Noro, N, Sugimoto, H, Suzuki, M, Tsuda, S.
Deposit date:2008-02-14
Release date:2008-08-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Crystal structure and mutational analysis of Ca2+-independent type II antifreeze protein from longsnout poacher, Brachyopsis rostratus
J.Mol.Biol., 382, 2008
1WVR
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BU of 1wvr by Molmil
Crystal Structure of a CRISP family Ca-channel blocker derived from snake venom
Descriptor: CADMIUM ION, Triflin
Authors:Shikamoto, Y, Suto, K, Yamazaki, Y, Morita, T, Mizuno, H.
Deposit date:2004-12-24
Release date:2005-07-05
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a CRISP family Ca2+ -channel blocker derived from snake venom.
J.Mol.Biol., 350, 2005
1UJ8
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BU of 1uj8 by Molmil
Structures of ORF3 in Two Crystal Forms, a Member of Isc Machinery of E. coli Involved in the Assembly of Iron-Sulfur Clusters
Descriptor: Hypothetical protein yfhJ
Authors:Shimomura, Y, Takahashi, Y, Fukuyama, K.
Deposit date:2003-07-29
Release date:2005-02-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of Escherichia coli YfhJ protein, a member of the ISC machinery involved in assembly of iron-sulfur clusters.
Proteins, 60, 2005
2D2P
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BU of 2d2p by Molmil
The solution structure of micelle-bound peptide
Descriptor: Pituitary adenylate cyclase activating polypeptide-38
Authors:Tateishi, Y, Jee, J.G, Inooka, H, Tochio, H, Hiroaki, H, Shirakawa, M.
Deposit date:2005-09-14
Release date:2006-09-26
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:The solution structure of micelle-bound peptide
To be Published
2EYY
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BU of 2eyy by Molmil
CT10-Regulated Kinase isoform I
Descriptor: v-crk sarcoma virus CT10 oncogene homolog isoform a
Authors:Kobashigawa, Y, Tanaka, S, Inagaki, F.
Deposit date:2005-11-10
Release date:2006-11-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural basis for the transforming activity of human cancer-related signaling adaptor protein CRK.
Nat.Struct.Mol.Biol., 14, 2007
2EYV
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BU of 2eyv by Molmil
SH2 domain of CT10-Regulated Kinase
Descriptor: v-crk sarcoma virus CT10 oncogene homolog isoform a
Authors:Kobashigawa, Y, Tanaka, S, Inagaki, F.
Deposit date:2005-11-10
Release date:2006-11-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural basis for the transforming activity of human cancer-related signaling adaptor protein CRK.
Nat.Struct.Mol.Biol., 14, 2007
2EYW
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BU of 2eyw by Molmil
N-terminal SH3 domain of CT10-Regulated Kinase
Descriptor: v-crk sarcoma virus CT10 oncogene homolog isoform a
Authors:Kobashigawa, Y, Tanaka, S, Inagaki, F.
Deposit date:2005-11-10
Release date:2006-11-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural basis for the transforming activity of human cancer-related signaling adaptor protein CRK.
Nat.Struct.Mol.Biol., 14, 2007
2EYZ
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BU of 2eyz by Molmil
CT10-Regulated Kinase isoform II
Descriptor: v-crk sarcoma virus CT10 oncogene homolog isoform a
Authors:Kobashigawa, Y, Tanaka, S, Inagaki, F.
Deposit date:2005-11-10
Release date:2006-11-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural basis for the transforming activity of human cancer-related signaling adaptor protein CRK.
Nat.Struct.Mol.Biol., 14, 2007
2EYX
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BU of 2eyx by Molmil
C-Terminal SH3 domain of CT10-Regulated Kinase
Descriptor: v-crk sarcoma virus CT10 oncogene homolog isoform a
Authors:Kobashigawa, Y, Tanaka, S, Inagaki, F.
Deposit date:2005-11-10
Release date:2006-11-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural basis for the transforming activity of human cancer-related signaling adaptor protein CRK.
Nat.Struct.Mol.Biol., 14, 2007

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PDB entries from 2024-09-11

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