Chemie Search results for query - Protein Data Bank Japan

English 日本語简体中文繁體中文 한국어

✖

Menu

RCSB PDB PDBe BMRB Adv. Search Search help

PDB Info pages Status search Chemie search: 898 results BIRD

OTU

OTU
Name:	3-O-alpha-D-glucopyranosyl-D-fructose
Formula:	C12 H22 O11
SMILES:	O=C(C(OC1OC(C(O)C(O)C1O)CO)C(O)C(O)CO)CO
InChi:	InChI=1S/C12H22O11/c13-1-4(16)7(18)11(5(17)2-14)23-12-10(21)9(20)8(19)6(3-15)22-12/h4,6-16,18-21H,1-3H2/t4-,6-,7-,8-,9+,10-,11-,12-/m1/s1
Synonyms:	3-O-alpha-D-glucosyl-D-fructose
Definition date:	2011-11-01
Last modified:	2020-07-17
Identifier:	3-O-alpha-D-glucopyranosyl-D-fructose

7CV

7CV
Name:	6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose
Formula:	C8 H16 O5
SMILES:	C1(O)C(OC)C(C(C(O1)C)O)OC
InChi:	InChI=1S/C8H16O5/c1-4-5(9)6(11-2)7(12-3)8(10)13-4/h4-10H,1-3H3/t4-,5-,6+,7+,8+/m0/s1
Synonyms:	6-deoxy-2,3-di-O-methyl-alpha-L-mannose
Definition date:	2016-10-05
Last modified:	2020-07-17
Release date:	2017-10-18
Identifier:	6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose

7D1

7D1
Name:	1,5-anhydro-2-deoxy-D-arabino-hexitol
Formula:	C6 H12 O4
SMILES:	OC[CH]1OCC[CH](O)[CH]1O
InChi:	InChI=1S/C6H12O4/c7-3-5-6(9)4(8)1-2-10-5/h4-9H,1-3H2/t4-,5-,6+/m1/s1
Synonyms:	(2~{R},3~{S},4~{R})-2-(hydroxymethyl)oxane-3,4-diol
Definition date:	2016-10-07
Last modified:	2020-07-17
Release date:	2017-01-11
Identifier:	(2~{R},3~{S},4~{R})-2-(hydroxymethyl)oxane-3,4-diol

OX2

OX2
Name:	(1R)-1,5-anhydro-1-(5-methyl-1,3,4-oxadiazol-2-yl)-D-glucitol
Formula:	C9 H14 N2 O6
SMILES:	OC1C(O)C(O)C(OC1CO)c2nnc(o2)C
InChi:	InChI=1S/C9H14N2O6/c1-3-10-11-9(16-3)8-7(15)6(14)5(13)4(2-12)17-8/h4-8,12-15H,2H2,1H3/t4-,5-,6+,7-,8-/m1/s1
Synonyms:	2-(BETA-D-GLUCOPYRANOSYL)-5-METHYL-1,3,4-OXADIAZOLE
Definition date:	2004-10-05
Last modified:	2020-07-17
Identifier:	(1R)-1,5-anhydro-1-(5-methyl-1,3,4-oxadiazol-2-yl)-D-glucitol

7GP

7GP
Name:	N-[ethoxy(oxo)acetyl]-beta-D-glucopyranosylamine
Formula:	C10 H17 N O8
SMILES:	O=C(NC1OC(C(O)C(O)C1O)CO)C(=O)OCC
InChi:	InChI=1S/C10H17NO8/c1-2-18-10(17)8(16)11-9-7(15)6(14)5(13)4(3-12)19-9/h4-7,9,12-15H,2-3H2,1H3,(H,11,16)/t4-,5-,6+,7-,9-/m1/s1
Synonyms:	ETHYL-N-(BETA-D-GLUCOPYRANOSYL)OXAMATE
Definition date:	2006-01-25
Last modified:	2020-07-17
Identifier:	N-[ethoxy(oxo)acetyl]-beta-D-glucopyranosylamine

7JZ

7JZ
Name:	2-deoxy-2,2-difluoro-beta-D-lyxo-hexopyranose
Formula:	C6 H10 F2 O5
SMILES:	FC1(F)C(O)C(O)C(OC1O)CO
InChi:	InChI=1S/C6H10F2O5/c7-6(8)4(11)3(10)2(1-9)13-5(6)12/h2-5,9-12H,1H2/t2-,3+,4+,5-/m1/s1
Synonyms:	2-DEOXY-2,2-DIFLUORO-BETA-D-GALACTOPYRANOSYL-ENZYME INTERMEDIATE
Definition date:	2009-05-19
Last modified:	2020-07-17
Identifier:	2-deoxy-2,2-difluoro-beta-D-lyxo-hexopyranose

7K2

7K2
Name:	[(3S,4R,5R)-4,5-dihydroxypiperidin-3-yl]methyl 1-thio-alpha-D-mannopyranoside
Formula:	C12 H23 N O7 S
SMILES:	OC[CH]1O[CH](SC[CH]2CNC[CH](O)[CH]2O)[CH](O)[CH](O)[CH]1O
InChi:	InChI=1S/C12H23NO7S/c14-3-7-9(17)10(18)11(19)12(20-7)21-4-5-1-13-2-6(15)8(5)16/h5-19H,1-4H2/t5-,6-,7-,8-,9-,10+,11+,12-/m1/s1
Synonyms:	(2~{R},3~{S},4~{S},5~{S},6~{R})-2-[[(3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)piperidin-3-yl]methylsulfanyl]-6-(hydroxymethy l)oxane-3,4,5-triol
Definition date:	2016-11-03
Last modified:	2020-07-17
Release date:	2017-08-09
Identifier:	(2~{R},3~{S},4~{S},5~{S},6~{R})-2-[[(3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)piperidin-3-yl]methylsulfanyl]-6-(hydroxymethy l)oxane-3,4,5-triol

7K3

7K3
Name:	1-thio-alpha-D-mannopyranose
Formula:	C6 H12 O5 S
SMILES:	OC[CH]1O[CH](S)[CH](O)[CH](O)[CH]1O
InChi:	InChI=1S/C6H12O5S/c7-1-2-3(8)4(9)5(10)6(12)11-2/h2-10,12H,1H2/t2-,3-,4+,5+,6-/m1/s1
Synonyms:	(2~{R},3~{S},4~{S},5~{S},6~{R})-2-(hydroxymethyl)-6-sulfanyl-oxane-3,4,5-triol
Definition date:	2016-11-03
Last modified:	2020-07-17
Release date:	2017-08-09
Identifier:	(2~{R},3~{S},4~{S},5~{S},6~{R})-2-(hydroxymethyl)-6-sulfanyl-oxane-3,4,5-triol

AGL

AGL
Name:	4-amino-4,6-dideoxy-alpha-D-glucopyranose
Formula:	C6 H13 N O4
SMILES:	OC1C(N)C(OC(O)C1O)C
InChi:	InChI=1S/C6H13NO4/c1-2-3(7)4(8)5(9)6(10)11-2/h2-6,8-10H,7H2,1H3/t2-,3-,4+,5-,6+/m1/s1
Synonyms:	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	4-amino-4,6-dideoxy-alpha-D-glucopyranose

AH2

AH2
Name:	1-deoxy-alpha-D-mannopyranose
Formula:	C6 H12 O5
SMILES:	OC[CH]1OC[CH](O)[CH](O)[CH]1O
InChi:	InChI=1S/C6H12O5/c7-1-4-6(10)5(9)3(8)2-11-4/h3-10H,1-2H2/t3-,4-,5-,6-/m1/s1
Synonyms:	1,5-Anhydromannitol
Definition date:	2017-01-13
Last modified:	2020-07-17
Release date:	2018-02-14
Identifier:	(2~{R},3~{S},4~{R},5~{R})-2-(hydroxymethyl)oxane-3,4,5-triol

AH8

AH8
Name:	(2R,3R,4R,5S)-2-azido-5-(hydroxymethyl)oxolane-3,4-diol
Formula:	C5 H9 N3 O4
SMILES:	[N-]=[N+]=N/C1OC(C(O)C1O)CO
InChi:	InChI=1S/C5H9N3O4/c6-8-7-5-4(11)3(10)2(1-9)12-5/h2-5,9-11H,1H2/t2-,3-,4+,5+/m0/s1
Synonyms:	(2R,3R,4R,5S)-2-azido-5-(hydroxymethyl)tetrahydrofuran-3,4-diol
Definition date:	2010-08-03
Last modified:	2020-07-17
Identifier:	(2R,3R,4R,5S)-2-azido-5-(hydroxymethyl)tetrahydrofuran-3,4-diol (non-preferred name)

AHG

AHG
Name:	2,5-anhydro-1,6-di-O-phosphono-D-glucitol
Formula:	C6 H14 O11 P2
SMILES:	O=P(OCC1OC(C(O)C1O)COP(=O)(O)O)(O)O
InChi:	InChI=1S/C6H14O11P2/c7-5-3(1-15-18(9,10)11)17-4(6(5)8)2-16-19(12,13)14/h3-8H,1-2H2,(H2,9,10,11)(H2,12,13,14)/t3-,4+,5-,6-/m1/s1
Synonyms:	2,5-ANHYDROGLUCITOL-1,6-BIPHOSPHATE
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	2,5-anhydro-1,6-di-O-phosphono-D-glucitol

AHM

AHM
Name:	2,5-anhydro-1,6-di-O-phosphono-D-mannitol
Formula:	C6 H14 O11 P2
SMILES:	O=P(OCC1OC(C(O)C1O)COP(=O)(O)O)(O)O
InChi:	InChI=1S/C6H14O11P2/c7-5-3(1-15-18(9,10)11)17-4(6(5)8)2-16-19(12,13)14/h3-8H,1-2H2,(H2,9,10,11)(H2,12,13,14)/t3-,4-,5-,6-/m1/s1
Synonyms:	2,5-ANHYDROMANNITOL-1,6-DIPHOSPHATE
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	2,5-anhydro-1,6-di-O-phosphono-D-mannitol

AHR

AHR
Name:	alpha-L-arabinofuranose
Formula:	C5 H10 O5
SMILES:	OC1C(OC(O)C1O)CO
InChi:	InChI=1S/C5H10O5/c6-1-2-3(7)4(8)5(9)10-2/h2-9H,1H2/t2-,3-,4+,5+/m0/s1
Synonyms:	alpha-L-arabinose
Definition date:	2002-04-23
Last modified:	2020-07-17
Identifier:	alpha-L-arabinofuranose

AIG

AIG
Name:	hexyl 3-amino-3-deoxy-beta-D-galactopyranoside
Formula:	C12 H25 N O5
SMILES:	O(CCCCCC)C1OC(C(O)C(N)C1O)CO
InChi:	InChI=1S/C12H25NO5/c1-2-3-4-5-6-17-12-11(16)9(13)10(15)8(7-14)18-12/h8-12,14-16H,2-7,13H2,1H3/t8-,9+,10+,11-,12-/m1/s1
Synonyms:	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-3,5-DIOL
Definition date:	2003-10-27
Last modified:	2020-07-17
Identifier:	hexyl 3-amino-3-deoxy-beta-D-galactopyranoside

ALL

ALL
Name:	beta-D-allopyranose
Formula:	C6 H12 O6
SMILES:	C1(C(C(C(C(CO)O1)O)O)O)O
InChi:	InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4-,5-,6-/m1/s1
Synonyms:	beta-D-allose
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	beta-D-allopyranose

ALX

ALX
Name:	2-O-phosphono-alpha-D-glucopyranose
Formula:	C6 H13 O9 P
SMILES:	O=P(OC1C(O)C(O)C(OC1O)CO)(O)O
InChi:	InChI=1S/C6H13O9P/c7-1-2-3(8)4(9)5(6(10)14-2)15-16(11,12)13/h2-10H,1H2,(H2,11,12,13)/t2-,3-,4+,5-,6+/m1/s1
Synonyms:	2-O-phosphono-alpha-D-glucose
Definition date:	2014-09-11
Last modified:	2020-07-17
Release date:	2015-08-19
Identifier:	2-O-phosphono-alpha-D-glucopyranose

AMG

AMG
Name:	methyl alpha-D-galactopyranoside
Formula:	C7 H14 O6
SMILES:	OC1C(O)C(O)C(OC1OC)CO
InChi:	InChI=1S/C7H14O6/c1-12-7-6(11)5(10)4(9)3(2-8)13-7/h3-11H,2H2,1H3/t3-,4+,5+,6-,7+/m1/s1
Synonyms:	ALPHA-METHYL-D-GALACTOSIDE
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	methyl alpha-D-galactopyranoside

AMN

AMN
Name:	methyl 5-acetamido-9-amino-3,5,9-trideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid
Formula:	C12 H22 N2 O8
SMILES:	O=C(O)C1(OC)OC(C(O)C(O)CN)C(NC(=O)C)C(O)C1
InChi:	InChI=1S/C12H22N2O8/c1-5(15)14-8-6(16)3-12(21-2,11(19)20)22-10(8)9(18)7(17)4-13/h6-10,16-18H,3-4,13H2,1-2H3,(H,14,15)(H,19,20)/t6-,7+,8+,9+,10+,12+/m0/s1
Synonyms:	9-DEOXY-9-AMINO-2-O-METHYL-5-N-ACETYL-ALPHA-D-NEURAMINIC ACID
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	methyl 5-(acetylamino)-9-amino-3,5,9-trideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid

AMU

AMU
Name:	N-acetyl-beta-muramic acid
Formula:	C11 H19 N O8
SMILES:	O=C(O)C(OC1C(O)C(OC(O)C1NC(=O)C)CO)C
InChi:	InChI=1S/C11H19NO8/c1-4(10(16)17)19-9-7(12-5(2)14)11(18)20-6(3-13)8(9)15/h4,6-9,11,13,15,18H,3H2,1-2H3,(H,12,14)(H,16,17)/t4-,6-,7-,8-,9-,11-/m1/s1
Synonyms:	N-acetyl-muramic acid
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	2-(acetylamino)-3-O-[(1R)-1-carboxyethyl]-2-deoxy-beta-D-glucopyranose

AMV

AMV
Name:	methyl 2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-beta-D-glucopyranoside
Formula:	C12 H21 N O8
SMILES:	O=C(O)C(OC1C(O)C(OC(OC)C1NC(=O)C)CO)C
InChi:	InChI=1S/C12H21NO8/c1-5(11(17)18)20-10-8(13-6(2)15)12(19-3)21-7(4-14)9(10)16/h5,7-10,12,14,16H,4H2,1-3H3,(H,13,15)(H,17,18)/t5-,7-,8-,9-,10-,12-/m1/s1
Synonyms:	METHYL 2-(ACETYLAMINO)-3-O-[(1R)-1-CARBOXYETHYL]-2-DEOXY-BETA-D-GLUCOPYRANOSIDE
Definition date:	2006-10-25
Last modified:	2020-07-17
Identifier:	methyl 2-(acetylamino)-3-O-[(1R)-1-carboxyethyl]-2-deoxy-beta-D-glucopyranoside

ANA

ANA
Name:	methyl 4-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid
Formula:	C14 H23 N O10
SMILES:	O=C(O)C1(OC)OC(C(O)C(O)CO)C(NC(=O)C)C(OC(=O)C)C1
InChi:	InChI=1S/C14H23NO10/c1-6(17)15-10-9(24-7(2)18)4-14(23-3,13(21)22)25-12(10)11(20)8(19)5-16/h8-12,16,19-20H,4-5H2,1-3H3,(H,15,17)(H,21,22)/t8-,9+,10-,11-,12-,14-/m1/s1
Synonyms:	4-O-ACETYL-ALPHA-2-OMETHYL-5-N-ACETYL-ALPHA-D-NEURAMINIC ACID
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	methyl 4-O-acetyl-5-(acetylamino)-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid

AOG

AOG
Name:	octyl 3-amino-3-deoxy-beta-D-galactopyranoside
Formula:	C14 H29 N O5
SMILES:	O(CCCCCCCC)C1OC(C(O)C(N)C1O)CO
InChi:	InChI=1S/C14H29NO5/c1-2-3-4-5-6-7-8-19-14-13(18)11(15)12(17)10(9-16)20-14/h10-14,16-18H,2-9,15H2,1H3/t10-,11+,12+,13-,14-/m1/s1
Synonyms:	4-AMINO-2-OCTYLOXY-6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-3,5-DIOL
Definition date:	2003-10-28
Last modified:	2020-07-17
Identifier:	octyl 3-amino-3-deoxy-beta-D-galactopyranoside

05L

05L
Name:	heptyl 1-seleno-beta-D-glucopyranoside
Formula:	C13 H26 O5 Se
SMILES:	[Se](CCCCCCC)C1OC(C(O)C(O)C1O)CO
InChi:	InChI=1S/C13H26O5Se/c1-2-3-4-5-6-7-19-13-12(17)11(16)10(15)9(8-14)18-13/h9-17H,2-8H2,1H3/t9-,10-,11+,12-,13+/m1/s1
Synonyms:	heptyl 1-seleno-beta-D-glucoside
Definition date:	2011-11-29
Last modified:	2020-07-17
Identifier:	heptyl 1-seleno-beta-D-glucopyranoside

AQA

AQA
Name:	4-deoxy-beta-L-threo-hex-4-enopyranuronic acid
Formula:	C6 H8 O6
SMILES:	O=C(O)C=1OC(C(C(C=1)O)O)O
InChi:	InChI=1S/C6H8O6/c7-2-1-3(5(9)10)12-6(11)4(2)8/h1-2,4,6-8,11H,(H,9,10)/t2-,4+,6-/m0/s1
Synonyms:	4-deoxy-beta-L-threo-hex-4-enuronic acid
Definition date:	2011-06-24
Last modified:	2020-07-17
Identifier:	4-deoxy-beta-L-threo-hex-4-enopyranuronic acid

<21 22 23 24 25 26 27 28 293031 32 33 34 35 36 >

222415

PDB entries from 2024-07-10

PDB statistics

PDBj update info

Contact PDBj

numon