News on 2012-09-20

The URLs for ftp/rsync services have been changed as follows. The previous URLs are still available for a while.

• pdb.protein.osaka-u.ac.jp -> ftp.pdbj.org
• snapshots.pdbj.org -> snapshots.pdbj.org

The ftp command will connect to an anonymous ftp server at PDBj.

ftp ftp.pdbj.org 

The following is the new URLs to download various PDB or EMDB data using FTP. Please refer to PDB Archive page for more information.

• PDB Exchange Format (mmCIF):

   ftp://ftp.pdbj.org/pub/pdb/data/structures/divided/mmCIF/ 
  

• PDBML format (all):

   ftp://ftp.pdbj.org/pub/pdb/data/structures/divided/XML/ 
  

• PDBML format (no-atom):

   ftp://ftp.pdbj.org/pub/pdb/data/structures/divided/XML-noatom/ 
  

• PDBML format (ext-atom):

   ftp://ftp.pdbj.org/pub/pdb/data/structures/divided/XML-extatom/ 
  

• PDB format:

   ftp://ftp.pdbj.org/pub/pdb/data/structures/divided/pdb/ 
  

• EMDB data:

   ftp://ftp.pdbj.org/pub/emdb/structures