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9Z6Z

Structure of the resting EcDRT3 reverse transcriptase in complex with its non-coding RNA

Summary for 9Z6Z
Entry DOI10.2210/pdb9z6z/pdb
EMDB information73865 76002
DescriptorDrt3a reverse transcriptase protein, Drt3b reverse transcriptase protein, non-coding RNA, ... (7 entities in total)
Functional Keywordsdrt3-ncrna complex, reverse transcriptase, anti-phage complex, immune system
Biological sourceEscherichia coli
More
Total number of polymer chains30
Total formula weight1079103.98
Authors
Deng, P.,Gao, A. (deposition date: 2025-11-14, release date: 2026-04-29)
Primary citationDeng, P.,Lee, H.,Armijo, C.,Wang, H.,Gao, A.
Protein-templated synthesis of dinucleotide repeat DNA by an antiphage reverse transcriptase.
Science, :eaed1656-eaed1656, 2026
Cited by
PubMed Abstract: Defense-associated reverse transcriptases (DRTs) are widespread bacterial anti-phage systems that use unconventional mechanisms of polynucleotide synthesis. We show that DRT3, which comprises two distinct RTs (Drt3a and Drt3b) and a noncoding RNA (ncRNA), synthesizes alternating poly(GT/AC) double-stranded DNA. Cryo-electron microscopy structures at 2.6 Å resolution reveal a D3-symmetric 6:6:6 complex of Drt3a, Drt3b, and ncRNA. Drt3a produces the poly(GT) strand using a conserved ACACAC template within the ncRNA. Notably, Drt3b synthesizes a complementary, protein-primed poly(AC) strand in the complete absence of a nucleic acid template, using conserved active site residues specific to Drt3b to enforce precise base alternation. These findings expand the functional landscape of nucleic acid polymerases, revealing a protein-templated mechanism for sequence-specific DNA synthesis.
PubMed: 41990131
DOI: 10.1126/science.aed1656
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (2.6 Å)
Structure validation

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PDB entries from 2026-06-17

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