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9Z63

Structure of the sodium-dependent phosphate importer SLC34A2, PFA- and Na+-bound

Summary for 9Z63
Entry DOI10.2210/pdb9z63/pdb
EMDB information73832
DescriptorSolute carrier family 34 member 2a, 12H07 Heavy Chain, 12H07 Light Chain, ... (5 entities in total)
Functional Keywordsinorganic phosphate importer, transport protein
Biological sourceDanio rerio (zebrafish)
More
Total number of polymer chains3
Total formula weight118701.58
Authors
Zhu, Q.,Diver, M.M. (deposition date: 2025-11-13, release date: 2026-07-29)
Primary citationZhu, Q.,Almakki, O.,Diver, M.M.
Structural and mechanistic insights into SLC34 phosphate import.
Biorxiv, 2026
Cited by
PubMed Abstract: Dysregulation of inorganic phosphate (Pi) homeostasis contributes to metabolic disease, cancer, pathological calcification, and kidney disease. Systemic phosphate balance is regulated by SLC34 transporters that mediate renal Pi retention (SLC34A1/A3) and intestinal dietary Pi absorption (SLC34A2). SLC34s couple Pi uptake to the symport of sodium (Na ) down its electrochemical gradient. Mutations or altered expression of SLC34 proteins are linked to disorders such as chronic kidney disease (CKD), where hyperphosphatemia is a major complication, and the lung disease pulmonary alveolar microlithiasis (PAM), caused by inactivating SLC34A2 mutations. SLC34A2 is also overexpressed in most ovarian and uterine tumors, making it an attractive target for antibody-drug conjugates. We present cryo-EM structures of SLC34A2 when the transporter is empty, bound to Na ions only, fully loaded with Na ions and Pi, and bound to an inhibitor phosphonoformic acid (PFA), revealing its distinct architecture, substrate and ion binding sites, the role of Na , and multiple transporter states. Pi binds at a highly symmetric, membrane-embedded pocket positioned approximately mid-membrane and is coordinated by its signature QSSS repeat motifs. Na shapes the Pi-binding pocket and drives the transition from the outward-open to occluded state. Integrated with functional analyses, these structures reveal that SLC34 transporters operate through an atypical alternating access cycle defined by coordinated elevator movements of an auxiliary gate domain. This work lays a foundational framework for understanding Pi regulation and opens new avenues for therapeutic strategies targeting disorders linked to phosphate imbalance.
PubMed: 42244560
DOI: 10.64898/2026.05.25.727688
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (3.02 Å)
Structure validation

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