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9VKS

Cryo-EM structure of F-ATP synthase c-ring from Mycobacteroides abscessus (Backbone)

Summary for 9VKS
Entry DOI10.2210/pdb9vks/pdb
EMDB information65141
DescriptorATP synthase subunit c (1 entity in total)
Functional Keywordshydrolase, atp synthase, membrane protein, mycobacterium abscessus, mycobacterial, c-ring, nontuberculous mycobacteria
Biological sourceMycobacteroides abscessus subsp. abscessus
Total number of polymer chains9
Total formula weight73426.28
Authors
Fong, T.C.,Saw, W.-G.,Mathiyazakan, V.,Wong, C.F.,Grueber, G. (deposition date: 2025-06-23, release date: 2026-01-14)
Primary citationFong, T.C.,Saw, W.G.,Mathiyazakan, V.,Wong, C.F.,Gruber, G.
The Mycobacterium abscessus F-ATP synthase structure reveals mechanistic elements enabling rational drug design to combat NTM lung disease.
Structure, 2025
Cited by
PubMed Abstract: The increasing global incidence rate of nontuberculous mycobacteria pulmonary infections is an emerging public health crisis, with Mycobacterium abscessus (Mab) being one of the most virulent and treatment-refractory of these pathogens. Mab exhibits extensive intrinsic and acquired drug resistance mechanisms that neutralize most antimicrobials against this pathogen, causing a clinical conundrum. As Mab relies on oxidative phosphorylation as its main energy source, its essential F-ATP synthase is a promising drug target but remains poorly understood due to a lack of host expression systems. Here, we present the expression, isolation, and structural characterization of Mab's F-ATP synthase. Cryo-EM reveals three nucleotide-driven rotational states at atomic resolution, highlighting key catalytic centers, a mycobacteria-specific α-subunit extension involved in the inhibition of ATP hydrolysis, energy transmission via the γε-stalk, and mechanochemical coupling by the δ-subunit. The structural blueprint allows precise target engagement and optimization of hits-to-leads and existing anti-Mab inhibitors targeting the engine.
PubMed: 41475343
DOI: 10.1016/j.str.2025.12.005
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (5.61 Å)
Structure validation

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