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9VC9

Cryo-EM structure of Shewanella decolorationis ComEC

Summary for 9VC9
Entry DOI10.2210/pdb9vc9/pdb
Related9VC6 9VCB 9VCF
EMDB information64949
DescriptorDna internalization-related competence protein rec2, Lauryl Maltose Neopentyl Glycol, ZINC ION (3 entities in total)
Functional Keywordscompetence, dna channel, membrane protein, hydrolase
Biological sourceShewanella decolorationis
Total number of polymer chains1
Total formula weight90740.82
Authors
Hirano, H.,Nureki, O. (deposition date: 2025-06-05, release date: 2026-04-29)
Primary citationHirano, H.,Tsuji, N.,Chiba, S.,Nureki, O.
Structural basis for DNA processing and membrane translocation by ComEC in natural transformation.
Science, 392:311-316, 2026
Cited by
PubMed Abstract: Natural transformation is one of the major pathways of horizontal gene transfer in bacteria, enabling the acquisition of extracellular DNA and its integration into the host genome. ComEC is a membrane protein responsible for DNA translocation in this process, yet its precise function and structure have remained elusive. Here, we report cryo-electron microscopy structures of ComEC in DNA-free, single-stranded DNA (ssDNA)-bound, and double-stranded DNA (dsDNA)-bound forms, together with biochemical analyses. These structures reveal that ComEC cleaves one strand of dsDNA at its extracellular domain and guides the remaining strand into a positively charged pore formed within the membrane domain. These findings provide a structural basis for the long-hypothesized roles of ComEC in both DNA processing and translocation across the inner membrane during natural transformation.
PubMed: 41990170
DOI: 10.1126/science.aea3485
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (2.77 Å)
Structure validation

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PDB entries from 2026-06-17

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