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9VC6

Cryo-EM structure of Bacillus halodurans ComEC

Summary for 9VC6
Entry DOI10.2210/pdb9vc6/pdb
Related9VC9 9VCB 9VCF
EMDB information64944
DescriptorCompetence protein ComEC, Lauryl Maltose Neopentyl Glycol, ZINC ION (3 entities in total)
Functional Keywordscompetence, dna channel, membrane protein, hydrolase
Biological sourceHalalkalibacterium halodurans C-125
Total number of polymer chains1
Total formula weight95514.96
Authors
Hirano, H.,Nureki, O. (deposition date: 2025-06-05, release date: 2026-04-29)
Primary citationHirano, H.,Tsuji, N.,Chiba, S.,Nureki, O.
Structural basis for DNA processing and membrane translocation by ComEC in natural transformation.
Science, 392:311-316, 2026
Cited by
PubMed Abstract: Natural transformation is one of the major pathways of horizontal gene transfer in bacteria, enabling the acquisition of extracellular DNA and its integration into the host genome. ComEC is a membrane protein responsible for DNA translocation in this process, yet its precise function and structure have remained elusive. Here, we report cryo-electron microscopy structures of ComEC in DNA-free, single-stranded DNA (ssDNA)-bound, and double-stranded DNA (dsDNA)-bound forms, together with biochemical analyses. These structures reveal that ComEC cleaves one strand of dsDNA at its extracellular domain and guides the remaining strand into a positively charged pore formed within the membrane domain. These findings provide a structural basis for the long-hypothesized roles of ComEC in both DNA processing and translocation across the inner membrane during natural transformation.
PubMed: 41990170
DOI: 10.1126/science.aea3485
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (2.71 Å)
Structure validation

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PDB entries from 2026-06-17

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