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9U9C

Crystal structure of NDM-1 in complex with hydrolyzed amoxicillin

This is a non-PDB format compatible entry.
Summary for 9U9C
Entry DOI10.2210/pdb9u9c/pdb
DescriptorMetallo-beta-lactamase type 2, ZINC ION, (2~{R},4~{S})-2-[(1~{R})-1-[[(2~{R})-2-azanyl-2-(4-hydroxyphenyl)ethanoyl]amino]-2-oxidanyl-2-oxidanylidene-ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, ... (4 entities in total)
Functional Keywordshydrolase, ndm-1
Biological sourceKlebsiella pneumoniae
Total number of polymer chains2
Total formula weight52357.52
Authors
Shi, X.,Zhang, Q.,Liu, W. (deposition date: 2025-03-27, release date: 2025-07-09)
Primary citationShi, X.,Yang, H.,Dai, Y.,Zhao, H.,Li, Y.,Li, Y.,Zhou, X.,Yan, H.,Zhang, Q.,Liu, W.
Crystal structure reveals the hydrophilic R1 group impairs NDM-1-ligand binding via water penetration at L3
J Struct Biol X, :100133-, 2025
Cited by
DOI: 10.1016/j.yjsbx.2025.100133
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (1.25 Å)
Structure validation

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PDB entries from 2025-07-09

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