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9SRU

Cryo-EM structure of Mlc in complex with ptsG operator DNA

Summary for 9SRU
Entry DOI10.2210/pdb9sru/pdb
EMDB information55156
DescriptorDNA-binding transcriptional repressor Mlc, DNA (27-MER), ZINC ION, ... (4 entities in total)
Functional Keywordsrepressor, dna-binding protein, transcription regulation, gene regulation, carbohydrate utilization, metal-binding, dna, operator, dna binding protein
Biological sourceEscherichia coli
More
Total number of polymer chains8
Total formula weight235512.85
Authors
Roth, P.,Fotiadis, D. (deposition date: 2025-09-25, release date: 2026-07-22)
Primary citationRoth, P.,Fender, I.,Jeckelmann, J.M.,Ucurum, Z.,Lemmin, T.,Fotiadis, D.
Structural basis of Mlc-mediated transcriptional regulation of carbohydrate metabolism.
Nat Commun, 2026
Cited by
PubMed Abstract: The global transcriptional repressor Mlc of Escherichia coli regulates genes involved in carbohydrate transport and metabolism, particularly glucose uptake via the glucose-specific phosphotransferase system (PTS). Unlike conventional repressors, Mlc exemplifies a system in which interactions with diverse macromolecules govern its activity. Here, we present cryo-electron microscopy structures of Mlc alone and in complexes with regulatory partners, including the glucose-specific PTS transporter IICB, a cognate DNA operator and the anti-repressor MtfA, capturing multiple assemblies central to transcription control. These structures reveal the molecular architecture of Mlc and its interactions with binding partners. Together with molecular dynamics simulations, they provide insights into the structural dynamics of these complexes. Our findings establish the structural basis of membrane-transporter involvement in transcriptional regulation, the mechanism of anti-repressor action and DNA recognition. This work provides a structural framework for understanding bacterial transcriptional regulation across diverse systems.
PubMed: 42436118
DOI: 10.1038/s41467-026-75270-8
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (2.47 Å)
Structure validation

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