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9RAO

Class A CTX-M-14 E166A mutant in complex with Cloxacillin at room temperature

Summary for 9RAO
Entry DOI10.2210/pdb9rao/pdb
DescriptorBeta-lactamase, CLOXACILLIN (OPEN FORM) (3 entities in total)
Functional Keywordsantibiotic resistance, class a beta-lactamase, isoxazolyl penicillins, protein binding
Biological sourceKlebsiella pneumoniae
Total number of polymer chains1
Total formula weight31389.15
Authors
Gore, G.,Schulz, E.C. (deposition date: 2025-05-21, release date: 2026-01-14)
Primary citationGore, G.,Prester, A.,von Stetten, D.,Bartels, K.,Schulz, E.C.
Binding mode of Isoxazolyl Penicillins to a Class-A beta-lactamase at ambient conditions.
Commun Chem, 8:387-387, 2025
Cited by
PubMed Abstract: The predominant resistance mechanism observed in Gram-negative bacteria involves the production of β-lactamases, which catalyse the hydrolysis of β-lactam antibiotics, thereby rendering them ineffective. Although Isoxazolyl Penicillins have been available since the 1970s, there are currently no structures in complex with class-A β-lactamases available. Here we have analysed the structure of the clinically relevant β-lactamase CTX-M-14 from Klebsiella pneumoniae near physiological temperatures, via serial synchrotron crystallography. We demonstrate the acyl-enzyme intermediates of the catalytically impaired CTX-M-14 mutant E166A in complex with three Isoxazolyl-Penicillins: Oxacillin, Cloxacillin and Dicloxacillin. Structural comparisons of CTX-M-Penicillin complexes show that, while conserved active-site interactions are maintained, each Isoxazolyl-Penicillin adopts a distinct conformation. While the three derivatives differ only by one and two chlorine atoms, respectively, their conformational heterogeneity appears to be increased by chlorination of the phenyl ring.
PubMed: 41326695
DOI: 10.1038/s42004-025-01801-x
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (1.7 Å)
Structure validation

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