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9PFX

Crystal structure of native HDO-family N-oxygenase RohS from Pseudomonas brassicacearum strain DF41 (PbrRohS)

Summary for 9PFX
Entry DOI10.2210/pdb9pfx/pdb
DescriptorPbrRohS, 1,2-ETHANEDIOL (3 entities in total)
Functional Keywordsazomycin, biosynthetic protein, n-oxygenase, heme-oxygenase-like dimetal/domain-containing oxidase/oxygenase (hdo) family
Biological sourcePseudomonas brassicacearum
Total number of polymer chains1
Total formula weight35154.39
Authors
Wei, Z.-W.,Higgins, M.A.,Ryan, K.S. (deposition date: 2025-07-07, release date: 2026-04-01)
Primary citationWei, Z.W.,Salamon, P.,Higgins, M.A.,Ryan, K.S.
Crystal structure of RohS, a heme-oxygenase-like N-oxygenase from azomycin biosynthesis.
J.Biol.Chem., :111389-111389, 2026
Cited by
PubMed Abstract: The nitro group is an important functional group found in the nitroimidazoles, antibiotic therapeutics for anaerobic pathogens. In the biosynthetic pathway to the nitroimidazole antibiotic azomycin, a nitro-forming enzyme RohS - a member of the heme-oxygenase-like dimetal/domain-containing oxidase/oxygenase (HDO) family - catalyzes a six-electron oxidation of 2-aminoimidazole to 2-nitroimidazole. Here we present the 2.20 Å resolution crystal structure of RohS and identify a potential active site pocket consisting of seven key residues important for metal coordination. By comparing the structures and sequences of two RohS homologs - one functionally active and one inactive - we convert the inactive RohS to its active form, thus revealing a key residue for metal coordination in RohS catalysis. Altogether, our work provides structural basis for further mechanistic investigation of this six-electron oxidation process and provides insight into the expanding repertoire of the HDO protein family and nitro-formation N-oxygenases.
PubMed: 41866038
DOI: 10.1016/j.jbc.2026.111389
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (2.2 Å)
Structure validation

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PDB entries from 2026-04-01

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