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9O13

Kv2.1 with 4 voltage sensors down and a constricted pore

Summary for 9O13
Entry DOI10.2210/pdb9o13/pdb
EMDB information49996
DescriptorPotassium voltage-gated channel subfamily B member 1 (1 entity in total)
Functional Keywordsvoltage-gated potassium channel, membrane protein
Biological sourceHomo sapiens (human)
Total number of polymer chains4
Total formula weight384006.84
Authors
Mandala, V.S.,MacKinnon, R. (deposition date: 2025-04-03, release date: 2025-05-28)
Primary citationMandala, V.S.,MacKinnon, R.
Electric field-induced pore constriction in the human K v 2.1 channel.
Proc.Natl.Acad.Sci.USA, 122:e2426744122-e2426744122, 2025
Cited by
PubMed Abstract: Gating in voltage-dependent ion channels is regulated by the transmembrane voltage. This form of regulation is enabled by voltage-sensing domains (VSDs) that respond to transmembrane voltage differences by changing their conformation and exerting force on the pore to open or close it. Here, we use cryogenic electron microscopy to study the neuronal K2.1 channel in lipid vesicles with and without a voltage difference across the membrane. Hyperpolarizing voltage differences displace the positively charged S4 helix in the voltage sensor by one helical turn (~5 Å). When this displacement occurs, the S4 helix changes its contact with the pore at two different interfaces. When these changes are observed in fewer than four voltage sensors, the pore remains open, but when they are observed in all four voltage sensors, the pore constricts. The constriction occurs because the S4 helix, as it displaces inward, squeezes the right-handed helical bundle of pore-lining S6 helices. A similar conformational change occurs upon hyperpolarization of the EAG1 channel but with two helical turns displaced instead of one. Therefore, while K2.1 and EAG1 are from distinct architectural classes of voltage-dependent ion channels, called domain-swapped and non-domain-swapped, the way the voltage sensors gate their pores is very similar.
PubMed: 40366685
DOI: 10.1073/pnas.2426744122
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (5.8 Å)
Structure validation

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