9JH7

Cryo-EM structure of CpAgo in complex with the 5'-P guide DNA.

Summary for 9JH7

• Entry DOI: 10.2210/pdb9jh7/pdb
• EMDB information: 61474
• Descriptor: Clostridium perfringens Argonaute (CpAgo), DNA (5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3') (2 entities in total)
• Functional Keywords: pagos, nucleotide-binding pocket, paz, cryo-em, dna binding protein, dna binding protein-dna complex, dna binding protein/dna
• Biological source: Clostridium perfringens; More
• Total number of polymer chains: 2
• Total formula weight: 92917.52

Authors

Liu, Y.,Li, S.,Zhang, K. (deposition date: 2024-09-09, release date: 2025-07-30)

• Primary citation: Liu, Y.,Li, S.,Zhang, K.; Dimeric state and novel nucleotide-binding pocket drive CpAgo-mediated DNA cleavage; To Be Published,

Experimental method

ELECTRON MICROSCOPY (3.4 Å)