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9J7L

Structure of AAV8 capsid in complex with receptor

This is a non-PDB format compatible entry.
Summary for 9J7L
Entry DOI10.2210/pdb9j7l/pdb
EMDB information61206
DescriptorCapsid protein, Carboxypeptidase D (2 entities in total)
Functional Keywordsreceptor, aav8, complex, viral protein/hydrolase, viral protein-hydrolase complex
Biological sourceAdeno-associated virus - 8
More
Total number of polymer chains7
Total formula weight541983.78
Authors
Xu, H.,Wang, G.P.,Su, X.D. (deposition date: 2024-08-19, release date: 2025-07-23, Last modification date: 2025-09-24)
Primary citationDhungel, B.P.,Xu, H.,Nagarajah, R.,Vitale, J.,Wong, A.C.H.,Gokal, D.,Feng, Y.,Tabar, M.S.,Metierre, C.,Parsania, C.,Song, X.,Wang, G.,Su, X.D.,Bailey, C.G.,Rasko, J.E.J.
An alternate receptor for adeno-associated viruses.
Cell, 188:4924-, 2025
Cited by
PubMed Abstract: Systemic gene therapy using adeno-associated virus (AAV) vectors is approved for the treatment of several genetic disorders, but challenges and toxicities associated with high vector doses remain. We report an alternate receptor for AAV (AAVR2, carboxypeptidase D [CPD]), which is distinct from the multi-serotype AAV receptor (AAVR). AAVR2 enables the transduction of clade E AAVs, including AAV8, and determines an exclusive AAVR-independent transduction pathway for AAV11 and AAV12. We characterized direct binding between the AAV8 capsid and AAVR2 by cryo-electron microscopy (cryo-EM) and identified contact residues. We observed that AAV8 directly binds to the carboxypeptidase-like domain 1 of AAVR2 via its variable region VIII and demonstrated that AAV capsids that lack AAVR2 binding can be bioengineered to engage with AAVR2. Finally, we overexpressed a minimal functional AAVR2 to enhance AAV transduction in vivo. Our study provides insights into AAV biology and clinically deployable solutions to reduce dose-related toxicities associated with AAV vectors.
PubMed: 40664211
DOI: 10.1016/j.cell.2025.06.026
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (2.89 Å)
Structure validation

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