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9J77

Cryo-EM structure of CRL2-FEM1B (dimer 1)

Summary for 9J77
Entry DOI10.2210/pdb9j77/pdb
EMDB information61196
DescriptorElongin-C, Elongin-B, E3 ubiquitin-protein ligase RBX1, N-terminally processed, ... (7 entities in total)
Functional Keywordsubiquitination e3 ligase, cryo-em, protein binding
Biological sourceHomo sapiens (human)
More
Total number of polymer chains12
Total formula weight387706.48
Authors
Zhao, S.,Xu, C. (deposition date: 2024-08-18, release date: 2025-04-09, Last modification date: 2026-01-07)
Primary citationRaiff, A.,Zhao, S.,Bekturova, A.,Zenge, C.,Mazor, S.,Chen, X.,Ru, W.,Makaros, Y.,Ast, T.,Ordureau, A.,Xu, C.,Koren, I.
TOM20-driven E3 ligase recruitment regulates mitochondrial dynamics through PLD6.
Nat.Chem.Biol., 22:37-47, 2026
Cited by
PubMed Abstract: Mitochondrial homeostasis is maintained through complex regulatory mechanisms, including the balance of mitochondrial dynamics involving fusion and fission processes. A central player in this regulation is the ubiquitin-proteasome system (UPS), which controls the degradation of pivotal mitochondrial proteins. In this study, we identified cullin-RING E3 ligase 2 (CRL2) and its substrate receptor, FEM1B, as critical regulators of mitochondrial dynamics. Through proteomic analysis, we demonstrate here that FEM1B controls the turnover of PLD6, a key regulator of mitochondrial dynamics. Using structural and biochemical approaches, we show that FEM1B physically interacts with PLD6 and that this interaction is facilitated by the direct association of FEM1B with the mitochondrial import receptor TOM20. Ablation of FEM1B or disruption of the FEM1B-TOM20 interaction impairs PLD6 degradation and induces mitochondrial defects, phenocopying PLD6 overexpression. These findings underscore the importance of FEM1B in maintaining mitochondrial morphology and provide further mechanistic insights into how the UPS regulates mitochondrial homeostasis.
PubMed: 40263465
DOI: 10.1038/s41589-025-01894-4
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (3.56 Å)
Structure validation

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PDB entries from 2026-01-14

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