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9J5F

Solution structure of disulfide-directed multicyclic peptides with n-terminal helix

Summary for 9J5F
Entry DOI10.2210/pdb9j5f/pdb
Descriptorm1-2 (1 entity in total)
Functional Keywordsdisulfide-directed multicyclic peptides, unknown function
Biological sourcesynthetic construct
Total number of polymer chains1
Total formula weight3558.16
Authors
Fan, S.H.,Wu, C.L. (deposition date: 2024-08-12, release date: 2025-02-19, Last modification date: 2025-02-26)
Primary citationFan, S.,Li, J.,Zhuang, J.,Zhou, Q.,Mai, Y.,Lin, B.,Wang, M.W.,Wu, C.
Disulfide-Directed Multicyclic Peptides with N-Terminally Extendable alpha-Helices for Recognition and Activation of G Protein-Coupled Receptors.
J.Am.Chem.Soc., 147:4821-4832, 2025
Cited by
PubMed Abstract: Many peptide hormones adopt long α-helical structures upon interacting with their cognate receptors but often exhibit flexible conformations when unbound. Strategies that can stabilize long α-helices without disrupting their binding to receptors are still lacking, which hinders progress in their biological applications and drug development. Here, we present an approach that combines rational design with library screening to create and identify a unique disulfide-directed multicyclic peptide (DDMP) scaffold, which could effectively stabilize N-terminally extendable α-helices while displaying exceptional efficiency in disulfide pairing and oxidative folding. This DDMP scaffold was then utilized for stabilizing the α-helical structure of glucagon-like peptide-1 (GLP-1), resulting in a potent GLP-1 receptor (GLP-1R) agonist with a significantly improved α-helicity and proteolytic stability. By incorporating external α-helices into the DDMP scaffold, we can effectively preserve the native N-terminal α-helical structures while allowing for extensive evolution of the C-terminal disulfide-rich domain for enhancing target binding, as demonstrated by the generation of the DDMP-stabilized GLP-1 (g1:Ox). The cryo-electron microscopy structure of the g1:Ox-GLP-1R in complex with heterotrimeric G reveals the molecular basis for the potent binding between g1:Ox and GLP-1R. Specifically, the DDMP moiety establishes additional interactions with the extracellular domain of GLP-1R, which are absent in the case of GLP-1. Thus, this work offers a novel and effective approach for engineering therapeutic peptides and other peptide α-helices, ensuring that both the N- and C-terminal regions remain essential for target recognition and activation.
PubMed: 39688263
DOI: 10.1021/jacs.4c12808
PDB entries with the same primary citation
Experimental method
SOLUTION NMR
Structure validation

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