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9IZL

hVanin-1 complexed with X17

This is a non-PDB format compatible entry.
Summary for 9IZL
Entry DOI10.2210/pdb9izl/pdb
DescriptorPantetheinase, 8-oxa-2-azaspiro[4.5]decan-2-yl-[2-[(3~{S})-3-oxidanylpyrrolidin-1-yl]-1,3-thiazol-5-yl]methanone (3 entities in total)
Functional Keywordsinhibitor, complex, hvanin-1, hydrolase, membrane protein
Biological sourceHomo sapiens (human)
Total number of polymer chains2
Total formula weight103846.55
Authors
Fan, S.,Zhen, L.,Xie, T. (deposition date: 2024-08-01, release date: 2024-12-04, Last modification date: 2024-12-11)
Primary citationXie, T.,Cao, G.Y.,Zhang, S.,Li, M.K.,Jin, X.,Liu, L.,Wang, G.,Zhen, L.
Discovery of Thiazole Carboxamides as Novel Vanin-1 Inhibitors for Inflammatory Bowel Disease Treatment.
J.Med.Chem., 67:20372-20398, 2024
Cited by
PubMed Abstract: Inflammatory bowel disease (IBD) is a clinically heterogeneous disease demanding more therapeutic targets and intervention strategies. Vanin-1, an oxidative stress-regulating protein, has emerged as a promising target for alleviating inflammation and oxidative stress. In this study, a series of thiazole carboxamide derivatives as vanin-1 inhibitors were designed and synthesized. The preferred compound, , demonstrated potent inhibition against vanin-1 at the protein, HT-29 cell, and tissue levels, whose binding mode with the target was confirmed via the cocrystal structure. achieved a high bioavailability of 81% in rats, accompanied by concentration-dependent inhibition of serum vanin-1. In a DSS-induced mouse colitis model, exhibited potent anti-inflammatory and antioxidant activities, repressing the inflammatory factor expressions and myeloperoxidase activity, elevating the colonic glutathione reserve, and restoring the intestinal barrier. Collectively, these findings depict the discovery of a potent vanin-1 inhibitor, providing an opportunity for further drug candidate development for treating IBD.
PubMed: 39514323
DOI: 10.1021/acs.jmedchem.4c01838
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (2.28 Å)
Structure validation

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