9IX5

An agonist(compound 15n) of Thyroid Hormone Receptor B

This is a non-PDB format compatible entry.

Summary for 9IX5

• Entry DOI: 10.2210/pdb9ix5/pdb
• Descriptor: Thyroid hormone receptor beta, Nuclear receptor coactivator 2, 2-[(1-methoxy-7-naphthalen-2-yloxy-4-oxidanyl-isoquinolin-3-yl)carbonylamino]ethanoic acid, ... (4 entities in total)
• Functional Keywords: nuclear receptor ligand-binding domain, agonist, transcription
• Biological source: Homo sapiens (human); More
• Total number of polymer chains: 2
• Total formula weight: 31164.95

Authors

Yao, B.,Li, Y. (deposition date: 2024-07-26, release date: 2025-07-02, Last modification date: 2025-07-23)

Primary citation

Li, Q.,Yao, B.,Zhao, S.,Lu, Z.,Wu, X.,Lu, Z.,Wu, T.,Li, J.,Chen, X.,Chen, Z.,Zhang, C.,Wu, D.,Zhang, Y.,Xiang, Q.,Li, Y.,Xu, Y.
Discovery of a Potent, Selective, and Multiple His435 Mutation-Sensitive Thyroid Hormone Receptor beta Agonist.
J.Med.Chem., 68:13471-13490, 2025

PubMed Abstract: Beyond selectivity concerns for thyroid hormone receptor β (THR-β) agonists, intolerance to the His435 mutation remains a challenge. Following our previous study, we performed detailed modifications on the 7-position of isoquinoline, specifically targeting the hydrophobic region of the THR-β ligand-binding pocket (LBP). This led to the identification of compound , which showed potent THR-β agonistic activity (EC: 3.2 nM), moderately selectivity (∼10-fold), and good activation of multiple His435 mutants (EC: 134.2 nM to 515.5 nM). Co-crystal structures revealed that the introduction of small-volume groups into the hydrophobic pocket of THR-β almost did not significantly displace helix 11 or helix 3, explaining why can activate multiple His435 mutants simultaneously. Multiple experiments confirmed that exhibits excellent lipid metabolism, safety, and pharmacokinetic properties. Together, emerges as a potent, selective, and His435 mutation-sensitive THR-β agonist, offering potential for treating dyslipidemia, metabolic dysfunction-associated steatohepatitis (MASH), or resistance to thyroid hormone (RTH).

PubMed: 40539969
DOI: 10.1021/acs.jmedchem.5c00164

Experimental method

X-RAY DIFFRACTION (2.65 Å)