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9GB2

Extended phiCD508 baseplate

This is a non-PDB format compatible entry.
Summary for 9GB2
Entry DOI10.2210/pdb9gb2/pdb
EMDB information51195
Descriptorgp65 - Triplex 1a protein, gp66 - Triplex 2 protein, gp61 - Tail tube initiator, ... (6 entities in total)
Functional Keywordsbacteriophage, virus, needle, baseplate
Biological sourceClostridioides difficile
More
Total number of polymer chains42
Total formula weight1314502.43
Authors
Wilson, J.S.,Fagan, R.P.,Bullough, P.A. (deposition date: 2024-07-29, release date: 2025-03-26, Last modification date: 2025-04-09)
Primary citationWilson, J.S.,Fortier, L.C.,Fagan, R.P.,Bullough, P.A.
Molecular mechanism of bacteriophage contraction structure of an S-layer-penetrating bacteriophage.
Life Sci Alliance, 8:-, 2025
Cited by
PubMed Abstract: The molecular details of phage tail contraction and bacterial cell envelope penetration remain poorly understood and are completely unknown for phages infecting bacteria enveloped by proteinaceous S-layers. Here, we reveal the extended and contracted atomic structures of an intact contractile-tailed phage (φCD508) that binds to and penetrates the protective S-layer of the Gram-positive human pathogen The tail is unusually long (225 nm), and it is also notable that the tail contracts less than those studied in related contractile injection systems such as the model phage T4 (∼20% compared with ∼50%). Surprisingly, we find no evidence of auxiliary enzymatic domains that other phages exploit in cell wall penetration, suggesting that sufficient energy is released upon tail contraction to penetrate the S-layer and the thick cell wall without enzymatic activity. Instead, the unusually long tail length, which becomes more flexible upon contraction, likely contributes toward the required free energy release for envelope penetration.
PubMed: 40139691
DOI: 10.26508/lsa.202403088
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (3.43 Å)
Structure validation

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