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9E0X

Cryo-EM structure of Phi dynein

Summary for 9E0X
Entry DOI10.2210/pdb9e0x/pdb
Related9DZY 9E0K 9E0T 9E0U 9E0W
EMDB information47342 47360 47370 47371 47372 47373
DescriptorCytoplasmic dynein 1 heavy chain 1, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ... (4 entities in total)
Functional Keywordscomplex, human, motor protein
Biological sourceHomo sapiens (human)
Total number of polymer chains2
Total formula weight1111927.29
Authors
Nguyen, K.H.V.,Kendrick, A.A.,Leschziner, A.E. (deposition date: 2024-10-20, release date: 2025-07-09, Last modification date: 2026-01-21)
Primary citationNguyen, K.H.V.,Karasmanis, E.P.,Kendrick, A.A.,Reck-Peterson, S.L.,Leschziner, A.E.
Cryo-EM captures early intermediate steps in dynein activation by LIS1.
Nat Commun, 16:7054-7054, 2025
Cited by
PubMed Abstract: Cytoplasmic dynein-1 (dynein) is an essential molecular motor in eukaryotic cells. Dynein primarily exists in an autoinhibited Phi state and requires conformational changes to assemble with its cofactors and form active transport complexes. LIS1, a key dynein regulator, enhances dynein activation and assembly. Using cryo-EM and a human dynein-LIS1 sample incubated with ATP, we map the conformational landscape of dynein activation by LIS1 and identify an early intermediate state that we propose precedes the previously identified dynein-LIS1 Chi state. Mutations that disrupt this species, which we termed "Pre-Chi", lead to motility defects in vitro, emphasizing its functional importance. Together, our findings provide insights into how LIS1 relieves dynein autoinhibition during the activation pathway.
PubMed: 40750582
DOI: 10.1038/s41467-025-62185-z
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (2.7 Å)
Structure validation

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