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9CL0

Cryo-EM structure of human XPR1 in presence of inorganic phosphate and phytic acid

Summary for 9CL0
Entry DOI10.2210/pdb9cl0/pdb
EMDB information45657
DescriptorSolute carrier family 53 member 1 (1 entity in total)
Functional Keywordsion channel, phosphate transport, membrane protein
Biological sourceHomo sapiens (human)
Total number of polymer chains2
Total formula weight169982.97
Authors
Wang, Z.,Wu, H. (deposition date: 2024-07-10, release date: 2025-06-18)
Primary citationWu, H.,Sun, L.,Huo, T.,Wensel, T.G.,Horrigan, F.T.,Wang, Z.
The identification of XPR1 as a voltage- and phosphate-activated phosphate-permeable ion channel.
Nat Commun, 16:4519-4519, 2025
Cited by
PubMed Abstract: Maintaining a balance of inorganic phosphate (Pi) is vital for cellular functionality. Proper phosphate levels are managed through Pi import and export; and the processes governing Pi export remain the least understood. Xenotropic and Polytropic retrovirus Receptor 1 (XPR1) has been identified as the only known Pi export protein in mammals. In this study, we introduce the cryogenic electron microscopy structure of human XPR1 (hXPR1), unveiling a structural arrangement distinct from that of any known ion transporter. Our structural results suggest that hXPR1 may operate as an ion channel, a hypothesis supported by patch clamp recordings revealing hXPR1's voltage- and Pi-dependent activity and large unitary conductance. Further analyses, including the structure of hXPR1 in presence of Pi, and mutagenesis studies at one of the putative Pi binding sites, lead us to propose a plausible ion permeation pathway. Together, our results provide novel perspectives on the Pi transport mechanism of XPR1.
PubMed: 40374661
DOI: 10.1038/s41467-025-59678-2
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (2.3 Å)
Structure validation

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