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9BQ0

Complex structure of protein crystal of Tri17 with ATP

Summary for 9BQ0
Entry DOI10.2210/pdb9bq0/pdb
Related8TF7
DescriptorAMP-binding protein, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... (4 entities in total)
Functional Keywordsacyl-coa ligase, amp-binding domain, n-n bond formation, apo structure, ligase
Biological sourceStreptomyces tsukubensis
Total number of polymer chains4
Total formula weight248401.10
Authors
Zhai, R.,Zhang, W. (deposition date: 2024-05-08, release date: 2024-10-09)
Primary citationDel Rio Flores, A.,Zhai, R.,Kastner, D.W.,Seshadri, K.,Yang, S.,De Matias, K.,Shen, Y.,Cai, W.,Narayanamoorthy, M.,Do, N.B.,Xue, Z.,Marzooqi, D.A.,Kulik, H.J.,Zhang, W.
Enzymatic synthesis of azide by a promiscuous N-nitrosylase.
Nat.Chem., 2024
Cited by
PubMed Abstract: Azides are energy-rich compounds with diverse representation in a broad range of scientific disciplines, including material science, synthetic chemistry, pharmaceutical science and chemical biology. Despite ubiquitous usage of the azido group, the underlying biosynthetic pathways for its formation remain largely unknown. Here we report the characterization of an enzymatic route for de novo azide construction. We demonstrate that Tri17, a promiscuous ATP- and nitrite-dependent enzyme, catalyses organic azide synthesis through sequential N-nitrosation and dehydration of aryl hydrazines. Through biochemical, structural and computational analyses, we further propose a plausible molecular mechanism for azide synthesis that sets the stage for future biocatalytic applications and biosynthetic pathway engineering.
PubMed: 39333393
DOI: 10.1038/s41557-024-01646-2
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (2.9 Å)
Structure validation

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