8PNT

Structure of the human nuclear cap-binding complex bound to PHAX and m7G-capped RNA

8PNT の概要

• エントリーDOI: 10.2210/pdb8pnt/pdb
• EMDBエントリー: 17784
• 分子名称: Nuclear cap-binding protein subunit 1, Nuclear cap-binding protein subunit 2, Phosphorylated adapter RNA export protein, ... (4 entities in total)
• 機能のキーワード: nuclear cap-binding complex, phax, pol ii transcript metabolism, rna binding protein
• 由来する生物種: Homo sapiens (human); 詳細
• タンパク質・核酸の鎖数: 4
• 化学式量合計: 197286.44

構造登録者

Dubiez, E.,Pellegrini, E.,Foucher, A.E.,Cusack, S.,Kadlec, J. (登録日: 2023-07-01, 公開日: 2024-01-17)

主引用文献

Dubiez, E.,Pellegrini, E.,Finderup Brask, M.,Garland, W.,Foucher, A.E.,Huard, K.,Heick Jensen, T.,Cusack, S.,Kadlec, J.
Structural basis for competitive binding of productive and degradative co-transcriptional effectors to the nuclear cap-binding complex.
Cell Rep, 43:113639-113639, 2024

PubMed Abstract: The nuclear cap-binding complex (CBC) coordinates co-transcriptional maturation, transport, or degradation of nascent RNA polymerase II (Pol II) transcripts. CBC with its partner ARS2 forms mutually exclusive complexes with diverse "effectors" that promote either productive or destructive outcomes. Combining AlphaFold predictions with structural and biochemical validation, we show how effectors NCBP3, NELF-E, ARS2, PHAX, and ZC3H18 form competing binary complexes with CBC and how PHAX, NCBP3, ZC3H18, and other effectors compete for binding to ARS2. In ternary CBC-ARS2 complexes with PHAX, NCBP3, or ZC3H18, ARS2 is responsible for the initial effector recruitment but inhibits their direct binding to the CBC. We show that in vivo ZC3H18 binding to both CBC and ARS2 is required for nuclear RNA degradation. We propose that recruitment of PHAX to CBC-ARS2 can lead, with appropriate cues, to competitive displacement of ARS2 and ZC3H18 from the CBC, thus promoting a productive rather than a degradative RNA fate.

PubMed: 38175753
DOI: 10.1016/j.celrep.2023.113639

実験手法

ELECTRON MICROSCOPY (3.46 Å)