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8K4K

Crystal structure of human Biliverdin IX-beta reductase B with Olsalazine carbon derivative

Summary for 8K4K
Entry DOI10.2210/pdb8k4k/pdb
DescriptorFlavin reductase (NADPH), GLYCEROL, SULFATE ION, ... (6 entities in total)
Functional Keywordsplatelets, nadp, oxidoreductase-inhibitor complex, oxidoreductase/inhibitor
Biological sourceHomo sapiens (human)
Total number of polymer chains2
Total formula weight46848.47
Authors
Ha, J.H.,Jung, H.M.,dela Cerna, M.V.C.,Burlison, J.A.,Lee, D.,Ryu, K.S. (deposition date: 2023-07-19, release date: 2025-01-22, Last modification date: 2025-01-29)
Primary citationJung, H.M.,Ha, J.H.,Dela Cerna, M.V.C.,Burlison, J.A.,Choi, J.,Kim, B.R.,Bang, J.K.,Ryu, K.S.,Lee, D.
An Innovative Inhibitor with a New Chemical Moiety Aimed at Biliverdin IX beta Reductase for Thrombocytopenia and Resilient against Cellular Degradation.
Pharmaceutics, 16:-, 2024
Cited by
PubMed Abstract: Biliverdin IXβ reductase (BLVRB) has emerged as a promising therapeutic target for thrombocytopenia due to its involvement in reactive oxygen species (ROS) mechanisms. During the pursuit of inhibitors targeting BLVRB, olsalazine (OSA) became apparent as one of the most potent candidates. However, the direct application of OSA as a BLVRB inhibitor faces challenges, as it is prone to degradation into 5-aminosalicylic acid through cleavage of the diazenyl bond by abundant azoreductase (AzoR) enzymes in gut microbiota and eukaryotic cells. To overcome this obstacle, we devised olsalkene (OSK), an inhibitor where the diazenyl bond in OSA has been substituted with an alkene bond. OSK not only matches the efficacy of OSA but also demonstrates improved stability against degradation by AzoR, presenting a promising solution to this limitation. Furthermore, we have found that both OSK and OSA inhibit BLVRB, regardless of the presence of nicotinamide adenine dinucleotide phosphate, unlike other known inhibitors. This discovery opens new avenues for investigating the roles of BLVRB in blood disorders, including thrombocytopenia.
PubMed: 39339186
DOI: 10.3390/pharmaceutics16091148
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (1.7 Å)
Structure validation

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