8K2K

Crystal structure of Group 3 Oligosaccharide/Monosaccharide-releasing beta-N-acetylgalactosaminidase NgaDssm in complex with GalNAc-thiazoline

Summary for 8K2K

Entry DOI	10.2210/pdb8k2k/pdb
Descriptor	Oligosaccharide/Monosaccharide-releasing beta-N-acetylgalactosaminidase, (3aR,5R,6R,7R,7aR)-5-(hydroxymethyl)-2-methyl-5,6,7,7a-tetrahydro-3aH-pyrano[3,2-d][1,3]thiazole-6,7-diol, GLYCEROL, ... (6 entities in total)
Functional Keywords	glycoside hydrolase, hydrolase
Biological source	metagenome
Total number of polymer chains	1
Total formula weight	62800.65
Authors	Sumida, T.,Fushinobu, S. (deposition date: 2023-07-12, release date: 2024-04-24, Last modification date: 2024-05-22)
Primary citation	Sumida, T.,Hiraoka, S.,Usui, K.,Ishiwata, A.,Sengoku, T.,Stubbs, K.A.,Tanaka, K.,Deguchi, S.,Fushinobu, S.,Nunoura, T. Genetic and functional diversity of beta-N-acetylgalactosamine-targeting glycosidases expanded by deep-sea metagenome analysis. Nat Commun, 15:3543-3543, 2024 Cited by PubMed: 38730244 DOI: 10.1038/s41467-024-47653-2 PDB entries with the same primary citation
Experimental method	X-RAY DIFFRACTION (1.75 Å)

Structure validation