8IF2

Crystal structure of the receptor binding domain of SARS-CoV-2 Omicron BQ.1.1 variant spike protein in complex with its receptor ACE2

Summary for 8IF2

• Entry DOI: 10.2210/pdb8if2/pdb
• Descriptor: Processed angiotensin-converting enzyme 2, Spike protein S1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... (8 entities in total)
• Functional Keywords: sars-cov-2, spike protein, rbd, ace2, viral protein
• Biological source: Homo sapiens (human); More
• Total number of polymer chains: 2
• Total formula weight: 99516.44

Authors

Kimura, K.,Suzuki, T.,Hashiguchi, T. (deposition date: 2023-02-17, release date: 2023-05-17, Last modification date: 2023-05-24)

• Primary citation: Ito, J.,Suzuki, R.,Uriu, K.,Itakura, Y.,Zahradnik, J.,Kimura, K.T.,Deguchi, S.,Wang, L.,Lytras, S.,Tamura, T.,Kida, I.,Nasser, H.,Shofa, M.,Begum, M.M.,Tsuda, M.,Oda, Y.,Suzuki, T.,Sasaki, J.,Sasaki-Tabata, K.,Fujita, S.,Yoshimatsu, K.,Ito, H.,Nao, N.,Asakura, H.,Nagashima, M.,Sadamasu, K.,Yoshimura, K.,Yamamoto, Y.,Nagamoto, T.,Kuramochi, J.,Schreiber, G.,Saito, A.,Matsuno, K.,Takayama, K.,Hashiguchi, T.,Tanaka, S.,Fukuhara, T.,Ikeda, T.,Sato, K.; Convergent evolution of SARS-CoV-2 Omicron subvariants leading to the emergence of BQ.1.1 variant.; Nat Commun, 14:2671-2671, 2023; PubMed: 37169744; DOI: 10.1038/s41467-023-38188-z

Experimental method

X-RAY DIFFRACTION (2.78 Å)