8H4V

Mincle CRD complex with PGL trisaccharide

Summary for 8H4V

• Entry DOI: 10.2210/pdb8h4v/pdb
• Descriptor: C-type lectin domain family 4 member E, (2~{R},3~{R},4~{S},5~{S},6~{R})-6-(methoxymethyl)oxane-2,3,4,5-tetrol-(1-4)-6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose-(1-2)-3-O-methyl-alpha-L-rhamnopyranose, CALCIUM ION (3 entities in total)
• Functional Keywords: immune receptor, innate immunity, c-type lectin receptor, mycobacterium leprae, sugar binding protein
• Biological source: Bos taurus (cattle)
• Total number of polymer chains: 2
• Total formula weight: 36184.61

Authors

Ishizuka, S.,Nagae, M.,Yamasaki, S. (deposition date: 2022-10-11, release date: 2023-08-09, Last modification date: 2024-10-23)

Primary citation

Ishizuka, S.,van Dijk, J.H.M.,Kawakita, T.,Miyamoto, Y.,Maeda, Y.,Goto, M.,Le Calvez, G.,Groot, L.M.,Witte, M.D.,Minnaard, A.J.,van der Marel, G.A.,Ato, M.,Nagae, M.,Codee, J.D.C.,Yamasaki, S.
PGL-III, a Rare Intermediate of Mycobacterium leprae Phenolic Glycolipid Biosynthesis, Is a Potent Mincle Ligand.
Acs Cent.Sci., 9:1388-1399, 2023

PubMed Abstract: Although leprosy (Hansen's disease) is one of the oldest known diseases, the pathogenicity of () remains enigmatic. Indeed, the cell wall components responsible for the immune response against are as yet largely unidentified. We reveal here phenolic glycolipid-III (PGL-III) as an -specific ligand for the immune receptor Mincle. PGL-III is a scarcely present trisaccharide intermediate in the biosynthetic pathway to PGL-I, an abundant and characteristic glycolipid. Using activity-based purification, we identified PGL-III as a Mincle ligand that is more potent than the well-known trehalose dimycolate. The cocrystal structure of Mincle and a synthetic PGL-III analogue revealed a unique recognition mode, implying that it can engage multiple Mincle molecules. In Mincle-deficient mice infected with , increased bacterial burden with gross pathologies were observed. These results show that PGL-III is a noncanonical ligand recognized by Mincle, triggering protective immunity.

PubMed: 37521780
DOI: 10.1021/acscentsci.3c00040

Experimental method

X-RAY DIFFRACTION (2.4 Å)