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7WB9

Crystal structure of Bovine Pancreatic Trypsin in complex with 5-Chlorotryptamine at Room Temperature

Summary for 7WB9
Entry DOI10.2210/pdb7wb9/pdb
DescriptorCationic trypsin, 2-(5-chloranyl-1~{H}-indol-3-yl)ethanamine, DIMETHYL SULFOXIDE, ... (5 entities in total)
Functional Keywordshydrolase
Biological sourceBos taurus (cattle)
Total number of polymer chains1
Total formula weight23637.16
Authors
Sakai, N.,Okumura, H.,Yamamoto, M.,Kumasaka, T. (deposition date: 2021-12-15, release date: 2022-06-15, Last modification date: 2024-11-06)
Primary citationOkumura, H.,Sakai, N.,Murakami, H.,Mizuno, N.,Nakamura, Y.,Ueno, G.,Masunaga, T.,Kawamura, T.,Baba, S.,Hasegawa, K.,Yamamoto, M.,Kumasaka, T.
In situ crystal data-collection and ligand-screening system at SPring-8.
Acta Crystallogr.,Sect.F, 78:241-251, 2022
Cited by
PubMed Abstract: In situ diffraction data collection using crystallization plates has been utilized for macromolecules to evaluate crystal quality without requiring additional sample treatment such as cryocooling. Although it is difficult to collect complete data sets using this technique due to the mechanical limitation of crystal rotation, recent advances in methods for data collection from multiple crystals have overcome this issue. At SPring-8, an in situ diffraction measurement system was constructed consisting of a goniometer for a plate, an articulated robot and plate storage. Using this system, complete data sets were obtained utilizing the small-wedge measurement method. Combining this system with an acoustic liquid handler to prepare protein-ligand complex crystals by applying fragment compounds to trypsin crystals for in situ soaking, binding was confirmed for seven out of eight compounds. These results show that the system functioned properly to collect complete data for structural analysis and to expand the capability for ligand screening in combination with a liquid dispenser.
PubMed: 35647681
DOI: 10.1107/S2053230X22005283
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (1.56 Å)
Structure validation

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