7PR9

Crystal structure of Burkholderia pseudomallei heparanase in complex with covalent inhibitor VL166

Summary for 7PR9

Entry DOI	10.2210/pdb7pr9/pdb
Related	7PR7
Descriptor	Glyco_hydro_44 domain-containing protein, 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-(2R,3S,5R,6R)-2,3,4,5,6-pentakis(oxidanyl)cyclohexane-1-carboxylic acid, 1,2-ETHANEDIOL, ... (4 entities in total)
Functional Keywords	glycoside hydrolase, carbohydrate, glucuronidase, gh79, hydrolase
Biological source	Burkholderia pseudomallei (strain K96243)
Total number of polymer chains	2
Total formula weight	90472.30
Authors	Wu, L.,Armstrong, Z.,Davies, G.J. (deposition date: 2021-09-21, release date: 2022-08-03, Last modification date: 2024-01-31)
Primary citation	de Boer, C.,Armstrong, Z.,Lit, V.A.J.,Barash, U.,Ruijgrok, G.,Boyango, I.,Weitzenberg, M.M.,Schroder, S.P.,Sarris, A.J.C.,Meeuwenoord, N.J.,Bule, P.,Kayal, Y.,Ilan, N.,Codee, J.D.C.,Vlodavsky, I.,Overkleeft, H.S.,Davies, G.J.,Wu, L. Mechanism-based heparanase inhibitors reduce cancer metastasis in vivo. Proc.Natl.Acad.Sci.USA, 119:e2203167119-e2203167119, 2022 Cited by PubMed: 35881786 DOI: 10.1073/pnas.2203167119 PDB entries with the same primary citation
Experimental method	X-RAY DIFFRACTION (1.34 Å)

Structure validation