6SYQ

ASR Alternansucrase in complex with isomaltotriose

Summary for 6SYQ

• Entry DOI: 10.2210/pdb6syq/pdb
• Descriptor: Alternansucrase, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose, ... (6 entities in total)
• Functional Keywords: glucansucrase, polysaccharides, dextran, alternan, transferase, gh70, sucrose
• Biological source: Leuconostoc mesenteroides; More
• Total number of polymer chains: 2
• Total formula weight: 276292.84

Authors

Cioci, G.,Molina, M.,Moulis, C.,Remaud-Simeon, M. (deposition date: 2019-09-30, release date: 2020-06-17, Last modification date: 2024-01-24)

Primary citation

Molina, M.,Moulis, C.,Monties, N.,Guieysse, D.,Morel, S.,Cioci, G.,Remaud-Simeon, M.
A specific oligosaccharide-binding site in the alternansucrase catalytic domain mediates alternan elongation.
J.Biol.Chem., 295:9474-9489, 2020

PubMed Abstract: Microbial α-glucans produced by GH70 (glycoside hydrolase family 70) glucansucrases are gaining importance because of the mild conditions for their synthesis from sucrose, their biodegradability, and their current and anticipated applications that largely depend on their molar mass. Focusing on the alternansucrase (ASR) from NRRL B-1355, a well-known glucansucrase catalyzing the synthesis of both high- and low-molar-mass alternans, we searched for structural traits in ASR that could be involved in the control of alternan elongation. The resolution of five crystal structures of a truncated ASR version (ASRΔ2) in complex with different gluco-oligosaccharides pinpointed key residues in binding sites located in the A and V domains of ASR. Biochemical characterization of three single mutants and three double mutants targeting the sugar-binding pockets identified in domain V revealed an involvement of this domain in alternan binding and elongation. More strikingly, we found an oligosaccharide-binding site at the surface of domain A, distant from the catalytic site and not previously identified in other glucansucrases. We named this site surface-binding site (SBS) A1. Among the residues lining the SBS-A1 site, two (Gln and Tyr) promoted alternan elongation. Their substitution to alanine decreased high-molar-mass alternan yield by a third, without significantly impacting enzyme stability or specificity. We propose that the SBS-A1 site is unique to alternansucrase and appears to be designed to bind alternating structures, acting as a mediator between the catalytic site and the sugar-binding pockets of domain V and contributing to a processive elongation of alternan chains.

PubMed: 32409580
DOI: 10.1074/jbc.RA120.013028

Experimental method

X-RAY DIFFRACTION (3 Å)