6RIO
Imidazole Polyamide-DNA complex NMR structure (5'-CGATGTACATCG-3')
Summary for 6RIO
Entry DOI | 10.2210/pdb6rio/pdb |
NMR Information | BMRB: 34397 |
Descriptor | DNA (5'-(*(DC5)P*GP*AP*TP*GP*TP*AP*CP*AP*TP*CP*(DG3))-3'), 3-[3-[[4-[[4-[[4-[[4-[[(2~{R})-2-azaniumyl-4-[[1-methyl-4-[[1-methyl-4-[[1-methyl-4-[(1-methylimidazol-2-yl)carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]butanoyl]amino]-1-methyl-imidazol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]propanoylamino]propyl-dimethyl-azanium (2 entities in total) |
Functional Keywords | polyamide, dna, minor groove binder |
Biological source | synthetic construct |
Total number of polymer chains | 2 |
Total formula weight | 8404.20 |
Authors | Padroni, G.,Withers, J.M.,Taladriz-Sender, A.,Reichenbach, L.F.,Parkinson, J.A.,Burley, G.A. (deposition date: 2019-04-24, release date: 2019-06-12, Last modification date: 2024-05-15) |
Primary citation | Padroni, G.,Withers, J.M.,Taladriz-Sender, A.,Reichenbach, L.F.,Parkinson, J.A.,Burley, G.A. Sequence-Selective Minor Groove Recognition of a DNA Duplex Containing Synthetic Genetic Components. J.Am.Chem.Soc., 141:9555-9563, 2019 Cited by PubMed: 31117639DOI: 10.1021/jacs.8b12444 PDB entries with the same primary citation |
Experimental method | SOLUTION NMR |
Structure validation
Download full validation report