6JOE
Crystal structure of TrmD from Pseudomonas aeruginosa in complex with active-site inhibitor
Summary for 6JOE
Entry DOI | 10.2210/pdb6joe/pdb |
Descriptor | tRNA (guanine-N(1)-)-methyltransferase, ~{N}-[[4-[(4-azanylpiperidin-1-yl)methyl]phenyl]methyl]-4-oxidanylidene-3~{H}-thieno[2,3-d]pyrimidine-5-carboxamide, PHOSPHATE ION, ... (5 entities in total) |
Functional Keywords | trna methyltransferase, transferase |
Biological source | Pseudomonas aeruginosa UCBPP-PA14 |
Total number of polymer chains | 2 |
Total formula weight | 61563.23 |
Authors | Zhong, W.,Pasunooti, K.K.,Balamkundu, S.,Wong, Y.W.,Nah, Q.,Liu, C.F.,Lescar, J.,Dedon, P.C. (deposition date: 2019-03-20, release date: 2019-09-04, Last modification date: 2023-11-22) |
Primary citation | Zhong, W.,Pasunooti, K.K.,Balamkundu, S.,Wong, Y.H.,Nah, Q.,Gadi, V.,Gnanakalai, S.,Chionh, Y.H.,McBee, M.E.,Gopal, P.,Lim, S.H.,Olivier, N.,Buurman, E.T.,Dick, T.,Liu, C.F.,Lescar, J.,Dedon, P.C. Thienopyrimidinone Derivatives That Inhibit Bacterial tRNA (Guanine37-N1)-Methyltransferase (TrmD) by Restructuring the Active Site with a Tyrosine-Flipping Mechanism. J.Med.Chem., 62:7788-7805, 2019 Cited by PubMed: 31442049DOI: 10.1021/acs.jmedchem.9b00582 PDB entries with the same primary citation |
Experimental method | X-RAY DIFFRACTION (2.21 Å) |
Structure validation
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