6GFK

delta-N METTL16 MTase domain

6GFK の概要

• エントリーDOI: 10.2210/pdb6gfk/pdb
• 分子名称: U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ... (4 entities in total)
• 機能のキーワード: sam methyltransferase, transferase
• 由来する生物種: Homo sapiens (Human)
• タンパク質・核酸の鎖数: 3
• 化学式量合計: 87653.10

構造登録者

Chen, K.M.,Mendel, M.,Homolka, D.,McCarthy, A.A.,Pillai, R.S. (登録日: 2018-04-30, 公開日: 2018-09-19, 最終更新日: 2025-12-10)

主引用文献

Mendel, M.,Chen, K.M.,Homolka, D.,Gos, P.,Pandey, R.R.,McCarthy, A.A.,Pillai, R.S.
Methylation of Structured RNA by the m6A Writer METTL16 Is Essential for Mouse Embryonic Development.
Mol. Cell, 71:986-1000.e11, 2018

PubMed Abstract: Internal modification of RNAs with N-methyladenosine (mA) is a highly conserved means of gene expression control. While the METTL3/METTL14 heterodimer adds this mark on thousands of transcripts in a single-stranded context, the substrate requirements and physiological roles of the second mA writer METTL16 remain unknown. Here we describe the crystal structure of human METTL16 to reveal a methyltransferase domain furnished with an extra N-terminal module, which together form a deep-cut groove that is essential for RNA binding. When presented with a random pool of RNAs, METTL16 selects for methylation-structured RNAs where the critical adenosine is present in a bulge. Mouse 16-cell embryos lacking Mettl16 display reduced mRNA levels of its methylation target, the SAM synthetase Mat2a. The consequence is massive transcriptome dysregulation in ∼64-cell blastocysts that are unfit for further development. This highlights the role of an mA RNA methyltransferase in facilitating early development via regulation of SAM availability.

PubMed: 30197299
DOI: 10.1016/j.molcel.2018.08.004

実験手法

X-RAY DIFFRACTION (2.3 Å)