Mandelate oxidase mutant-Y128F with Benzoic acid

Summary for 6A0Y

Descriptor4-hydroxymandelate oxidase, FLAVIN MONONUCLEOTIDE, BENZOIC ACID, ... (4 entities in total)
Functional Keywordsfmn-dependent oxidase, flavoprotein
Biological sourceAmycolatopsis orientalis (Nocardia orientalis)
Total number of polymer chains1
Total molecular weight40852.27
Li, T.L.,Lin, K.H. (deposition date: 2018-06-06, release date: 2019-06-19, Last modification date: 2019-08-14)
Primary citation
Yeh, H.W.,Lin, K.H.,Lyu, S.Y.,Li, Y.S.,Huang, C.M.,Wang, Y.L.,Shih, H.W.,Hsu, N.S.,Wu, C.J.,Li, T.L.
Biochemical and structural explorations of alpha-hydroxyacid oxidases reveal a four-electron oxidative decarboxylation reaction.
Acta Crystallogr D Struct Biol, 75:733-742, 2019
PubMed: 31373572 (PDB entries with the same primary citation)
DOI: 10.1107/S2059798319009574
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.1912 0.3% 1.6% 4.5%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
PDB entries from 2020-08-05