5YXJ

FXR ligand binding domain

Summary for 5YXJ

DescriptorBile acid receptor, Peptide from Nuclear receptor coactivator 2, 2-[benzyl(methyl)amino]ethyl methyl 2,6-dimethyl-4-(3-nitrophenyl)pyridine-3,5-dicarboxylate, ... (4 entities in total)
Functional Keywordscomplex, nuclear protein
Biological sourceHomo sapiens (Human)
Total number of polymer chains4
Total molecular weight57259.75
Authors
Yi, L.,Yong, L. (deposition date: 2017-12-05, release date: 2019-03-13)
Primary citation
Yi, L.,Yong, L.
A ligand of drug binding to FXR
To Be Published,
Experimental method
X-RAY DIFFRACTION (2.62 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.25412 0.7% 6.3% 2.1%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 5yxj
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Molmil generated image of 5yxj
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Molmil generated image of 5yxj
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More Biological unit images

Molmil generated image of 5yxj
no rotation
Molmil generated image of 5yxj
rotated about x axis by 90°
Molmil generated image of 5yxj
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (5yxj.pdb2.gz [41.54 KB])
Coordinate files for Biological unit (5yxj.pdb1.gz [42.72 KB])